Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA   Type   Regulator
Locus tag   DQM73_RS01175 Genome accession   NZ_LS483346
Coordinates   214185..216158 (-) Length   657 a.a.
NCBI ID   WP_002926234.1    Uniprot ID   A0A2X3VNI7
Organism   Streptococcus sanguinis strain NCTC11085     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 209185..221158
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM73_RS01160 (NCTC11085_00226) - 209409..210431 (-) 1023 WP_002926241.1 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase -
  DQM73_RS01165 (NCTC11085_00227) - 210592..212298 (+) 1707 WP_032908249.1 ABC transporter ATP-binding protein -
  DQM73_RS12545 - 212300..212438 (+) 139 Protein_203 ABC transporter ATP-binding protein -
  DQM73_RS12550 - 212417..213145 (+) 729 Protein_204 ABC transporter ATP-binding protein -
  DQM73_RS12555 rcrQ 213281..214069 (+) 789 WP_407697566.1 ABC transporter ATP-binding protein Regulator
  DQM73_RS01175 (NCTC11085_00229) amiA 214185..216158 (-) 1974 WP_002926234.1 peptide ABC transporter substrate-binding protein Regulator
  DQM73_RS01180 (NCTC11085_00230) - 216386..217075 (+) 690 WP_002934505.1 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein -
  DQM73_RS01190 (NCTC11085_00231) - 217342..217791 (+) 450 WP_002926230.1 8-oxo-dGTP diphosphatase -
  DQM73_RS01195 (NCTC11085_00232) - 217875..218318 (+) 444 WP_002926229.1 dUTP diphosphatase -
  DQM73_RS01200 (NCTC11085_00233) - 218320..218835 (+) 516 WP_002926228.1 histidine phosphatase family protein -
  DQM73_RS01205 (NCTC11085_00234) radA 218842..220218 (+) 1377 WP_080561413.1 DNA repair protein RadA Machinery gene
  DQM73_RS01210 (NCTC11085_00235) - 220327..221043 (+) 717 WP_002916623.1 TIGR00266 family protein -

Sequence

Protein


Download         Length: 657 a.a.        Molecular weight: 72361.31 Da        Isoelectric Point: 4.6695

>NTDB_id=1137677 DQM73_RS01175 WP_002926234.1 214185..216158(-) (amiA) [Streptococcus sanguinis strain NCTC11085]
MRKSNILLAAGLTLLSVGLLTACSGGGSSQSSKKIYSYVFTSDPTTLDYIQSAKVSTHELTTNGVDGLLENDKYGNLAPS
IAEDWTVSPDGLVYTYKLRKDAKWYTADGEEYADVTAQDFVTGIKHAADIKSDALPLIQDSIKGLSEYAAGTNKDFSAVG
VKALDDHTVQYTLNKPETYWNSKTTSGVMMPVNEAFLEKQGKEFGQATKADSILYNGPFIMKSITSKSSVEFEKNPNYWD
KDKVKIDGVKLSYYDGSDQDSLARTFGDGGYSLARLYPATSSYSSIAEKYKDNIFMTEAGAGVGLISFNIDRQSYNHTSK
TSDEQKEATKKALLNKDFRQALAFALNRESYSAQVNGEDAAKPAVRNLFVPPTFVQANGKEFGTLVEESLASYGDEWKGI
KLDDGQDGLHNTDKAKAEFAKAKQALANEGVQFPIHLDVPVAQNSTNFVNRMQSLKQSLEEALGKDNVSVDLQMLAEDEA
LNITFNAEAASQEDWDINGLVGWEPDYQDPSTYLDILVPGNSTQTRTYLGFEDKDNAAAKAVGLDEYSKLIEEAGNETQD
VDKRYEKYAAAQAWLTDSALVVPTMSSRGAAPFISRIVPFTNSYAQTGTKDANYHKYVEISDEIVTTKDYQKAQEKWKKE
KEESNKKAQEDLAKHVK

Nucleotide


Download         Length: 1974 bp        

>NTDB_id=1137677 DQM73_RS01175 WP_002926234.1 214185..216158(-) (amiA) [Streptococcus sanguinis strain NCTC11085]
ATGAGAAAATCAAATATTCTTCTTGCCGCAGGTCTCACTCTGCTCTCTGTCGGCTTACTTACAGCTTGCTCTGGAGGCGG
AAGTTCCCAATCCAGCAAAAAAATCTACAGCTATGTCTTTACGTCTGATCCAACGACTTTGGACTACATCCAGTCCGCAA
AGGTATCTACCCACGAGCTGACTACAAATGGTGTAGATGGCCTGCTGGAAAATGATAAATATGGAAACTTAGCTCCGTCT
ATCGCAGAAGATTGGACAGTCTCTCCAGATGGTCTCGTCTATACCTATAAGCTGCGCAAAGATGCCAAGTGGTATACCGC
TGATGGCGAAGAATACGCAGATGTCACGGCTCAGGACTTTGTAACAGGTATCAAACATGCTGCCGATATCAAATCAGACG
CCCTCCCTCTTATCCAAGATTCTATCAAGGGACTGAGTGAATATGCAGCCGGTACCAACAAAGACTTTTCAGCTGTTGGA
GTCAAGGCACTGGACGATCATACGGTTCAATATACACTCAACAAGCCTGAAACCTACTGGAACTCTAAAACAACATCAGG
TGTTATGATGCCGGTCAACGAGGCCTTCCTAGAAAAGCAAGGCAAGGAATTCGGTCAGGCAACCAAAGCCGACTCCATTC
TGTATAACGGTCCATTTATCATGAAATCCATTACTTCTAAATCCTCTGTCGAATTTGAGAAGAACCCTAACTACTGGGAT
AAGGACAAGGTCAAGATTGATGGTGTCAAACTGTCTTACTACGATGGTTCTGACCAAGATTCATTAGCGCGGACCTTCGG
AGATGGCGGCTACAGTTTGGCAAGACTCTACCCAGCAACTTCCAGTTATTCCTCAATCGCTGAGAAATACAAAGATAATA
TCTTCATGACAGAAGCAGGAGCGGGGGTCGGTCTAATCAGCTTTAACATTGACCGTCAAAGTTATAACCATACTTCTAAA
ACCAGCGATGAACAAAAAGAAGCTACCAAAAAAGCTCTGCTGAACAAGGACTTCCGCCAAGCTCTAGCCTTTGCCCTTAA
CCGCGAAAGCTATTCGGCTCAGGTCAACGGAGAAGATGCAGCTAAGCCAGCTGTCCGTAATCTCTTTGTTCCGCCAACCT
TCGTACAAGCCAATGGCAAGGAATTTGGCACTCTGGTCGAAGAATCACTGGCTTCCTATGGTGACGAGTGGAAAGGTATC
AAGCTAGATGACGGTCAAGACGGTCTCCACAATACTGACAAAGCCAAGGCGGAATTTGCCAAAGCCAAGCAGGCTCTTGC
AAATGAAGGCGTACAATTCCCAATTCACCTAGATGTTCCTGTCGCTCAGAATTCTACTAACTTCGTCAACCGTATGCAAT
CTCTGAAACAGTCATTAGAAGAGGCTTTAGGCAAGGACAATGTCTCTGTAGACCTGCAGATGCTGGCTGAGGACGAAGCA
CTAAACATCACCTTCAATGCTGAAGCTGCTAGCCAGGAAGACTGGGATATCAACGGTCTCGTTGGCTGGGAGCCAGACTA
CCAAGATCCATCTACTTACCTAGACATTTTAGTCCCAGGTAACAGCACTCAGACCAGAACCTACCTTGGATTTGAAGACA
AAGACAATGCTGCTGCTAAAGCTGTAGGACTGGATGAGTACAGCAAACTGATTGAAGAGGCCGGAAACGAAACACAAGAT
GTTGACAAGCGTTATGAAAAATATGCTGCAGCTCAAGCATGGCTGACAGATAGTGCCCTCGTTGTGCCAACTATGAGCAG
CAGAGGAGCAGCACCGTTCATTTCTCGGATTGTGCCATTTACTAACTCTTATGCTCAGACAGGTACAAAAGACGCCAACT
ATCATAAATACGTGGAAATCAGTGATGAGATTGTCACAACTAAAGACTATCAAAAGGCCCAAGAAAAGTGGAAAAAAGAA
AAAGAGGAATCCAATAAAAAGGCCCAAGAAGATCTGGCTAAACATGTGAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(77-519)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2X3VNI7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA Streptococcus salivarius strain HSISS4

59.119

100

0.592
  amiA3 Streptococcus thermophilus LMD-9

58.118

100

0.583
  amiA3 Streptococcus thermophilus LMG 18311

57.511

100

0.577

Multiple sequence alignment