Detailed information NTG1137483

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: DQL23_RS04145
• Genome accession: NZ_LS483341
• Coordinates: 872605..873672 (+)
• Length: 355 a.a.
• NCBI ID: WP_008809622.1
• Uniprot ID: A0A0F2CNN2
• Organism: Streptococcus gordonii strain NCTC7865
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 867605..878672

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQL23_RS04130 (NCTC7865_00825)	amiA	868118..870109 (+)	1992	WP_060553921.1	peptide ABC transporter substrate-binding protein	Regulator
DQL23_RS04135 (NCTC7865_00826)	amiC	870174..871670 (+)	1497	WP_045634046.1	ABC transporter permease	Regulator
DQL23_RS04140 (NCTC7865_00827)	amiD	871670..872596 (+)	927	WP_045634045.1	oligopeptide ABC transporter permease OppC	Regulator
DQL23_RS04145 (NCTC7865_00828)	amiE	872605..873672 (+)	1068	WP_008809622.1	ABC transporter ATP-binding protein	Regulator
DQL23_RS04150 (NCTC7865_00829)	amiF	873683..874606 (+)	924	WP_060553922.1	ATP-binding cassette domain-containing protein	Regulator
DQL23_RS04155 (NCTC7865_00830)	comR/comR2	874805..875287 (+)	483	WP_060553923.1	sigma-70 family RNA polymerase sigma factor	Regulator
DQL23_RS04160 (NCTC7865_00830)	-	875564..877120 (+)	1557	WP_060553923.1	16S ribosomal RNA	-
DQL23_RS04165 (NCTC7865_00830)	-	877175..877247 (+)	73	WP_060553923.1	tRNA-Ala	-

Sequence

Protein

• Length: 355 a.a.
• Molecular weight: 39824.61 Da
• Isoelectric Point: 4.8872

>NTDB_id=1137483 DQL23_RS04145 WP_008809622.1 872605..873672(+) (amiE) [Streptococcus gordonii strain NCTC7865]
MIQNKNVILTARDIVVEFDVRDKVLTAIRGVSLDLVEGEVLALVGESGSGKSVLTKTFTGMLEDNGRVAQGVINYRGQDL
TTLKSNKDWEKIRGAKIATIFQDPMTSLDPINTIGSQITEVIIKHQGKDAKEAKEMAIDYMKKVGIPDAERRFEEYPFQY
SGGMRQRIVIAIALACRPDILICDEPTTALDVTIQAQIIELLKSLQNEYRFTTIFITHDLGVVASIADKVAVMYAGEIVE
YGTVEEIFYDPRHPYTWSLLSSLPQLANDHGELFSIPGTPPSLYTELKGDAFALRSDYAMQIDFEEKAPQFQVTETHWAK
TWLLHEDAPKVHKPEIIENLHDKIRLNMGFAHLEG

Nucleotide

• Length: 1068 bp

>NTDB_id=1137483 DQL23_RS04145 WP_008809622.1 872605..873672(+) (amiE) [Streptococcus gordonii strain NCTC7865]
ATGATACAAAATAAAAATGTAATATTGACTGCTCGCGATATTGTCGTGGAATTTGACGTTCGTGATAAAGTCCTGACAGC
CATTCGAGGTGTATCCCTTGATTTGGTTGAAGGAGAAGTATTAGCTTTGGTAGGAGAATCAGGATCAGGTAAGTCTGTGT
TGACTAAAACATTCACTGGGATGTTGGAAGATAATGGGCGCGTTGCGCAAGGTGTTATTAACTACCGTGGTCAAGATTTG
ACAACTTTAAAATCAAATAAAGATTGGGAAAAAATTCGTGGTGCTAAGATCGCTACGATTTTCCAAGATCCTATGACTAG
TTTGGATCCAATCAATACAATAGGAAGCCAAATTACTGAAGTTATTATCAAACACCAAGGCAAAGATGCAAAAGAAGCCA
AAGAAATGGCAATCGACTATATGAAAAAAGTTGGAATACCTGATGCAGAACGTCGGTTTGAAGAGTATCCTTTCCAATAT
TCTGGAGGAATGCGCCAACGTATTGTTATCGCGATTGCTCTTGCCTGTCGTCCAGATATTCTAATTTGTGATGAGCCAAC
AACAGCTTTGGATGTGACAATTCAAGCACAAATTATCGAACTTTTGAAATCATTGCAGAACGAATACCGCTTTACAACTA
TATTTATCACTCATGACTTGGGTGTTGTTGCTAGTATTGCCGATAAAGTAGCGGTTATGTATGCTGGTGAGATTGTTGAA
TACGGGACGGTTGAAGAAATTTTTTACGATCCACGCCATCCTTATACATGGAGCTTGTTATCTAGCTTGCCACAGTTGGC
CAATGATCATGGTGAACTCTTCTCTATCCCAGGAACTCCTCCGTCTCTTTATACCGAGTTGAAAGGTGATGCCTTTGCTC
TTCGTTCGGATTACGCTATGCAAATTGATTTCGAAGAAAAAGCACCACAATTCCAAGTCACAGAAACTCACTGGGCTAAA
ACTTGGTTGCTTCATGAAGATGCACCAAAGGTTCACAAGCCTGAAATTATTGAAAATTTACATGATAAAATTCGCTTGAA
TATGGGCTTTGCTCATTTAGAAGGCTAG

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (239-301)

• ABC transporter (ABC_tran) (29-187)

3D structure

• AlphaFold DB: A0A0F2CNN2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	87.252	99.437	0.868
amiE	Streptococcus thermophilus LMG 18311	85.552	99.437	0.851
amiE	Streptococcus thermophilus LMD-9	85.552	99.437	0.851
oppD	Streptococcus mutans UA159	54.155	98.31	0.532