Detailed information NTG1136765

Bioinformatically predicted

Overview

• Name: amiC
• Type: Regulator
• Locus tag: DQL47_RS08890
• Genome accession: NZ_LS483328
• Coordinates: 1845263..1846762 (-)
• Length: 499 a.a.
• NCBI ID: WP_043053407.1
• Uniprot ID: -
• Organism: Streptococcus equi subsp. zooepidemicus strain NCTC12090
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1840263..1851762

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQL47_RS08875 (NCTC12090_01796)	amiF	1842342..1843265 (-)	924	WP_012516278.1	ATP-binding cassette domain-containing protein	Regulator
DQL47_RS08880 (NCTC12090_01797)	amiE	1843258..1844328 (-)	1071	WP_012516279.1	ABC transporter ATP-binding protein	Regulator
DQL47_RS08885 (NCTC12090_01798)	amiD	1844337..1845263 (-)	927	WP_021321128.1	oligopeptide ABC transporter permease OppC	Regulator
DQL47_RS08890 (NCTC12090_01799)	amiC	1845263..1846762 (-)	1500	WP_043053407.1	ABC transporter permease	Regulator
DQL47_RS08895 (NCTC12090_01800)	amiA3	1846826..1848802 (-)	1977	WP_043053408.1	peptide ABC transporter substrate-binding protein	Regulator
DQL47_RS08900 (NCTC12090_01801)	pbp3	1849110..1850348 (+)	1239	WP_041785731.1	D-alanyl-D-alanine carboxypeptidase PBP3	-

Sequence

Protein

• Length: 499 a.a.
• Molecular weight: 55654.11 Da
• Isoelectric Point: 10.1102

>NTDB_id=1136765 DQL47_RS08890 WP_043053407.1 1845263..1846762(-) (amiC) [Streptococcus equi subsp. zooepidemicus strain NCTC12090]
MKKYIFERILRSLVSILLVTALTYTIVFTLVPKSLIFKQDPNYNKMVTTPDKKTNYLNTVFENMGYISYYSSKELQNKAS
KLDPSVTTAPTKANEKIYQKYIASVGNGWKLGRFTESKGFYAVREIPIYERVWNFFSHLVVIDHPWKIKDPKNPNLERYV
RPEIDPAVGPALVGSGTKHKYLIYFNKQFPFIHQNIVTFDLGMSYPTYANIPVVQVITQGQGRTLQKEVTFPTGKTKLSS
IDIYSRTYKTPSSLDSKDIANFGKGDAYTNTQNNYAEPSMIANSFKIGIVGVLLSYLFGLPIGMLMAYYKNGWFDRFSTA
ATTFMLALPSIALIYIVRFVGSYLGLPDTFPLLGAGDVRSYVLPALILGILGTPSTVVWFRRYIVDLQGSDFVRFARAKG
LSEFEISKNHLFKQAMVPIVNGIPQAIVGTIAGATLTETVFAFPGMGKMLIDSIKAANNSMVVGLVFIFAVLSILALLVG
DILMTILDPRIKLSGKGGK

Nucleotide

• Length: 1500 bp

>NTDB_id=1136765 DQL47_RS08890 WP_043053407.1 1845263..1846762(-) (amiC) [Streptococcus equi subsp. zooepidemicus strain NCTC12090]
ATGAAAAAATACATATTTGAACGCATATTGAGGTCGCTTGTTTCAATCCTGCTGGTAACCGCACTAACCTATACTATTGT
CTTTACCTTAGTGCCAAAAAGCTTGATTTTTAAGCAAGACCCTAATTACAATAAAATGGTGACAACACCTGATAAGAAAA
CCAATTATCTAAATACTGTTTTTGAAAATATGGGCTATATTTCCTATTACAGCAGTAAAGAACTGCAGAATAAGGCTTCA
AAGCTTGATCCTTCTGTAACAACTGCACCAACTAAGGCCAATGAAAAAATATATCAAAAATATATTGCTTCTGTCGGTAA
TGGTTGGAAGCTTGGGCGCTTTACAGAAAGTAAGGGATTTTATGCCGTTAGAGAGATTCCAATCTATGAGCGCGTGTGGA
ATTTCTTTAGCCATTTGGTTGTGATTGATCACCCATGGAAAATCAAGGATCCAAAAAATCCAAATCTAGAGCGTTATGTG
CGACCAGAAATTGACCCTGCTGTTGGTCCAGCCTTAGTTGGCTCTGGTACTAAGCACAAATACTTGATTTACTTCAACAA
GCAATTTCCATTTATCCATCAAAATATCGTAACCTTTGATTTGGGAATGTCCTATCCAACCTATGCCAATATTCCAGTTG
TTCAGGTTATCACTCAAGGACAAGGAAGAACACTTCAAAAAGAGGTCACCTTCCCAACAGGCAAAACAAAGCTGTCTTCA
ATCGATATTTACTCTCGAACCTATAAAACACCAAGCTCTTTAGATAGCAAGGATATTGCCAATTTTGGTAAGGGTGATGC
TTATACCAATACACAAAATAACTATGCAGAGCCATCTATGATTGCAAATTCCTTTAAGATTGGTATTGTCGGTGTCTTGT
TGTCCTATCTTTTTGGTTTGCCAATTGGTATGCTGATGGCTTATTATAAGAATGGCTGGTTTGACCGCTTTTCAACGGCT
GCCACAACCTTTATGTTAGCCCTGCCAAGCATTGCGCTTATCTATATTGTTCGATTTGTCGGTTCTTATTTGGGCTTGCC
AGATACCTTTCCGCTGCTAGGAGCAGGAGATGTTAGGTCTTATGTGCTGCCTGCTCTTATATTAGGAATTCTTGGTACAC
CAAGTACAGTAGTTTGGTTCCGACGCTATATTGTGGACTTGCAAGGCAGTGATTTTGTTCGCTTTGCACGAGCAAAGGGG
CTTTCAGAATTTGAGATTTCAAAAAATCATCTCTTTAAGCAGGCTATGGTGCCTATTGTTAACGGTATTCCACAAGCCAT
TGTCGGAACAATTGCCGGTGCAACCTTGACAGAGACGGTGTTTGCTTTCCCAGGAATGGGTAAAATGCTGATTGATTCCA
TAAAAGCTGCTAATAACTCTATGGTTGTTGGTCTTGTCTTTATTTTTGCTGTTTTATCAATATTAGCCTTGCTAGTAGGT
GATATTCTTATGACAATTTTAGATCCACGTATTAAATTATCAGGTAAAGGAGGTAAGTAA

Domains

Predicted by InterproScan.

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (299-492)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiC	Streptococcus salivarius strain HSISS4	62.525	100	0.625
amiC	Streptococcus thermophilus LMG 18311	62.525	100	0.625
amiC	Streptococcus thermophilus LMD-9	62.325	100	0.623