Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | MORIYA_RS15235 | Genome accession | NZ_LS483250 |
| Coordinates | 3279501..3280139 (+) | Length | 212 a.a. |
| NCBI ID | WP_112716468.1 | Uniprot ID | A0A330LS64 |
| Organism | Moritella yayanosii strain DB21MT 5 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 3274501..3285139
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MORIYA_RS15225 (MORIYA_3213) | - | 3277061..3277699 (-) | 639 | WP_112718633.1 | LuxR C-terminal-related transcriptional regulator | - |
| MORIYA_RS15230 (MORIYA_3214) | - | 3278126..3279499 (+) | 1374 | WP_112716466.1 | MFS transporter | - |
| MORIYA_RS15235 (MORIYA_3215) | ssb | 3279501..3280139 (+) | 639 | WP_112716468.1 | single-stranded DNA-binding protein | Machinery gene |
| MORIYA_RS15240 (MORIYA_3216) | - | 3280400..3282316 (+) | 1917 | WP_112716470.1 | EAL domain-containing protein | - |
| MORIYA_RS15245 (MORIYA_3217) | pilM | 3282466..3283359 (+) | 894 | WP_112716472.1 | pilus assembly protein PilM | - |
| MORIYA_RS15250 (MORIYA_3218) | - | 3283359..3283958 (+) | 600 | WP_112716474.1 | MSHA biogenesis protein MshI | - |
| MORIYA_RS15255 (MORIYA_3219) | - | 3283955..3284740 (+) | 786 | WP_112716476.1 | glucose-6-phosphate isomerase | - |
| MORIYA_RS15260 (MORIYA_3220) | - | 3284733..3285077 (+) | 345 | WP_112716478.1 | MSHA biogenesis protein MshK | - |
Sequence
Protein
Download Length: 212 a.a. Molecular weight: 23309.07 Da Isoelectric Point: 4.5268
>NTDB_id=1135267 MORIYA_RS15235 WP_112716468.1 3279501..3280139(+) (ssb) [Moritella yayanosii strain DB21MT 5]
MASRGVNKVIILGNLGNDPEIRSFPNGGAVANLTIATSESWRDKQTGEQREKTEWHRVAVFGKLAEIAGEYLRKGSQVYI
EGALQTRKWQDQNGQDRYTTEVVVQGFNGVMQMIGARQGGQQQQQGGGTYNSNSNQQSQQQNQNADWGQPQQSAAEPQQQ
GGGYNNSNQQPQQASQQAPQQQTPDPTSTPQQQAPQQGFNEPSADFDDDIPF
MASRGVNKVIILGNLGNDPEIRSFPNGGAVANLTIATSESWRDKQTGEQREKTEWHRVAVFGKLAEIAGEYLRKGSQVYI
EGALQTRKWQDQNGQDRYTTEVVVQGFNGVMQMIGARQGGQQQQQGGGTYNSNSNQQSQQQNQNADWGQPQQSAAEPQQQ
GGGYNNSNQQPQQASQQAPQQQTPDPTSTPQQQAPQQGFNEPSADFDDDIPF
Nucleotide
Download Length: 639 bp
>NTDB_id=1135267 MORIYA_RS15235 WP_112716468.1 3279501..3280139(+) (ssb) [Moritella yayanosii strain DB21MT 5]
ATGGCCAGTCGTGGCGTAAATAAAGTAATTATTCTTGGTAATTTAGGTAATGATCCTGAAATCCGCTCATTTCCAAATGG
TGGCGCGGTTGCCAATCTAACAATTGCGACAAGTGAATCATGGCGAGATAAGCAAACTGGCGAACAACGTGAGAAAACAG
AGTGGCACCGTGTTGCAGTATTCGGTAAATTAGCTGAAATTGCAGGTGAATACTTACGTAAAGGTTCACAGGTGTATATT
GAAGGTGCATTACAAACACGTAAATGGCAAGATCAAAATGGCCAAGACCGTTACACTACAGAAGTAGTAGTACAAGGTTT
TAACGGTGTAATGCAAATGATTGGTGCTCGTCAAGGCGGTCAACAACAGCAGCAAGGTGGCGGTACTTACAATAGTAATA
GTAACCAACAGTCACAACAGCAGAATCAAAATGCGGATTGGGGTCAACCACAACAATCTGCTGCTGAACCGCAACAACAG
GGTGGCGGTTATAATAATAGTAACCAACAACCACAGCAAGCATCACAACAGGCGCCACAGCAGCAAACTCCAGATCCGAC
TTCGACACCTCAACAGCAAGCTCCGCAGCAAGGTTTTAACGAACCTTCAGCTGATTTTGATGATGATATCCCGTTCTAG
ATGGCCAGTCGTGGCGTAAATAAAGTAATTATTCTTGGTAATTTAGGTAATGATCCTGAAATCCGCTCATTTCCAAATGG
TGGCGCGGTTGCCAATCTAACAATTGCGACAAGTGAATCATGGCGAGATAAGCAAACTGGCGAACAACGTGAGAAAACAG
AGTGGCACCGTGTTGCAGTATTCGGTAAATTAGCTGAAATTGCAGGTGAATACTTACGTAAAGGTTCACAGGTGTATATT
GAAGGTGCATTACAAACACGTAAATGGCAAGATCAAAATGGCCAAGACCGTTACACTACAGAAGTAGTAGTACAAGGTTT
TAACGGTGTAATGCAAATGATTGGTGCTCGTCAAGGCGGTCAACAACAGCAGCAAGGTGGCGGTACTTACAATAGTAATA
GTAACCAACAGTCACAACAGCAGAATCAAAATGCGGATTGGGGTCAACCACAACAATCTGCTGCTGAACCGCAACAACAG
GGTGGCGGTTATAATAATAGTAACCAACAACCACAGCAAGCATCACAACAGGCGCCACAGCAGCAAACTCCAGATCCGAC
TTCGACACCTCAACAGCAAGCTCCGCAGCAAGGTTTTAACGAACCTTCAGCTGATTTTGATGATGATATCCCGTTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
61.792 |
100 |
0.618 |
| ssb | Glaesserella parasuis strain SC1401 |
51.196 |
98.585 |
0.505 |
| ssb | Neisseria gonorrhoeae MS11 |
38.164 |
97.642 |
0.373 |
| ssb | Neisseria meningitidis MC58 |
38.164 |
97.642 |
0.373 |