Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ENTER_RS01430 | Genome accession | NZ_LR881936 |
| Coordinates | 304427..304957 (+) | Length | 176 a.a. |
| NCBI ID | WP_006177466.1 | Uniprot ID | A0AAE4E8Q4 |
| Organism | Enterobacter cancerogenus strain UPC1 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 299427..309957
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ENTER_RS01410 (ENTER_0286) | aphA | 299755..300468 (+) | 714 | WP_202561505.1 | acid phosphatase AphA | - |
| ENTER_RS01415 (ENTER_0287) | - | 300582..300998 (+) | 417 | WP_202561506.1 | secondary thiamine-phosphate synthase enzyme YjbQ | - |
| ENTER_RS01420 (ENTER_0288) | - | 301001..301354 (+) | 354 | WP_006177468.1 | MmcQ/YjbR family DNA-binding protein | - |
| ENTER_RS01425 (ENTER_0289) | uvrA | 301355..304180 (-) | 2826 | WP_006177467.1 | excinuclease ABC subunit UvrA | - |
| ENTER_RS01430 (ENTER_0291) | ssb | 304427..304957 (+) | 531 | WP_006177466.1 | single-stranded DNA-binding protein SSB1 | Machinery gene |
| ENTER_RS01435 (ENTER_0292) | - | 305002..306528 (-) | 1527 | WP_202561507.1 | EAL domain-containing protein | - |
| ENTER_RS01440 (ENTER_0293) | - | 306540..307304 (-) | 765 | WP_137273372.1 | EAL domain-containing protein | - |
| ENTER_RS01445 (ENTER_0294) | - | 307371..308876 (-) | 1506 | WP_202561508.1 | sensor domain-containing diguanylate cyclase | - |
| ENTER_RS01450 (ENTER_0295) | - | 309354..309602 (-) | 249 | WP_202561509.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 176 a.a. Molecular weight: 18835.84 Da Isoelectric Point: 5.2456
>NTDB_id=1132659 ENTER_RS01430 WP_006177466.1 304427..304957(+) (ssb) [Enterobacter cancerogenus strain UPC1]
MASRGVNKVILVGNLGQDPEVRYMPSGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVAGEYLRKGSQVYI
EGQLRTRKWTDQSGAEKYTTEVVVNVGGTMQMLGGRQGGGAPAGGGQNQQQGGWGQPQQPQGGNQFSGGAQSRPQQQSAP
APSNEPPMDFDDDIPF
MASRGVNKVILVGNLGQDPEVRYMPSGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVAGEYLRKGSQVYI
EGQLRTRKWTDQSGAEKYTTEVVVNVGGTMQMLGGRQGGGAPAGGGQNQQQGGWGQPQQPQGGNQFSGGAQSRPQQQSAP
APSNEPPMDFDDDIPF
Nucleotide
Download Length: 531 bp
>NTDB_id=1132659 ENTER_RS01430 WP_006177466.1 304427..304957(+) (ssb) [Enterobacter cancerogenus strain UPC1]
ATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTCGGTAATCTGGGCCAGGACCCGGAAGTACGCTACATGCCGAGTGG
TGGCGCAGTTGCCAACATTACGCTGGCTACGTCCGAATCCTGGCGTGATAAAGCGACCGGTGAGATGAAAGAGCAGACTG
AATGGCACCGCGTTGTGCTGTTTGGCAAACTGGCTGAAGTGGCCGGTGAATATCTGCGTAAGGGTTCTCAGGTCTATATC
GAAGGCCAGCTGCGTACCCGCAAATGGACCGATCAGTCCGGCGCTGAGAAGTACACCACTGAAGTGGTGGTAAACGTTGG
CGGCACCATGCAGATGCTGGGTGGCCGTCAGGGCGGTGGCGCACCGGCAGGTGGCGGCCAGAACCAGCAGCAGGGCGGTT
GGGGTCAGCCTCAGCAGCCACAGGGTGGCAACCAGTTCAGCGGCGGCGCGCAGTCTCGTCCGCAGCAGCAGTCCGCACCG
GCACCGTCTAACGAACCGCCAATGGACTTCGACGACGACATCCCGTTCTAA
ATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTCGGTAATCTGGGCCAGGACCCGGAAGTACGCTACATGCCGAGTGG
TGGCGCAGTTGCCAACATTACGCTGGCTACGTCCGAATCCTGGCGTGATAAAGCGACCGGTGAGATGAAAGAGCAGACTG
AATGGCACCGCGTTGTGCTGTTTGGCAAACTGGCTGAAGTGGCCGGTGAATATCTGCGTAAGGGTTCTCAGGTCTATATC
GAAGGCCAGCTGCGTACCCGCAAATGGACCGATCAGTCCGGCGCTGAGAAGTACACCACTGAAGTGGTGGTAAACGTTGG
CGGCACCATGCAGATGCTGGGTGGCCGTCAGGGCGGTGGCGCACCGGCAGGTGGCGGCCAGAACCAGCAGCAGGGCGGTT
GGGGTCAGCCTCAGCAGCCACAGGGTGGCAACCAGTTCAGCGGCGGCGCGCAGTCTCGTCCGCAGCAGCAGTCCGCACCG
GCACCGTCTAACGAACCGCCAATGGACTTCGACGACGACATCCCGTTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
76.667 |
100 |
0.784 |
| ssb | Glaesserella parasuis strain SC1401 |
56.216 |
100 |
0.591 |
| ssb | Neisseria meningitidis MC58 |
46.629 |
100 |
0.472 |
| ssb | Neisseria gonorrhoeae MS11 |
46.629 |
100 |
0.472 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
35.556 |
100 |
0.364 |