Detailed information NTG1132430

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: CFBP2533_RS19845
• Genome accession: NZ_LR828261
• Coordinates: 4705660..4707180 (+)
• Length: 506 a.a.
• NCBI ID: WP_168959575.1
• Uniprot ID: -
• Organism: Xanthomonas hortorum pv. pelargonii strain CFBP 2533 isolate Kemp 41
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 4700660..4712180

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CFBP2533_RS19825 (CFBP2533_40440)	-	4701468..4702151 (+)	684	WP_168959573.1	RIO1 family regulatory kinase/ATPase	-
CFBP2533_RS19830 (CFBP2533_40450)	-	4702493..4704466 (-)	1974	WP_168959574.1	beta-N-acetylglucosaminidase domain-containing protein	-
CFBP2533_RS19835 (CFBP2533_40460)	-	4704837..4705211 (-)	375	WP_199680230.1	P-II family nitrogen regulator	-
CFBP2533_RS19840 (CFBP2533_40470)	-	4705365..4705643 (+)	279	WP_023905487.1	accessory factor UbiK family protein	-
CFBP2533_RS19845 (CFBP2533_40480)	comM	4705660..4707180 (+)	1521	WP_168959575.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
CFBP2533_RS19850 (CFBP2533_40490)	-	4707270..4707779 (+)	510	WP_168959576.1	lipocalin family protein	-
CFBP2533_RS19855 (CFBP2533_40500)	-	4708276..4708452 (-)	177	WP_006449000.1	hypothetical protein	-
CFBP2533_RS19860 (CFBP2533_40510)	-	4708837..4710399 (+)	1563	WP_168959577.1	EAL domain-containing protein	-
CFBP2533_RS19865 (CFBP2533_40520)	-	4710650..4711774 (-)	1125	WP_168959578.1	acyl-CoA desaturase	-

Sequence

Protein

• Length: 506 a.a.
• Molecular weight: 53890.71 Da
• Isoelectric Point: 8.3450

>NTDB_id=1132430 CFBP2533_RS19845 WP_168959575.1 4705660..4707180(+) (comM) [Xanthomonas hortorum pv. pelargonii strain CFBP 2533 isolate Kemp 41]
MSLALVHSRARVGVHAPEVRVEVHLSGGLPSTQIVGLPEAAVRESRERVRAALLCAQFEFPARRITINLAPADLPKEGGR
FDLPIALGILAASGQIDRQALAEYEFLGELALTGELRGVDGVLPAALAAAQAGRRLIVPLANGAEAAIAGHVEAFTARTL
LEVCATLNGTQKAPAAELAVQALGARALPDMADVRGQPHARRALEIAAAGGHHLLLVGSPGCGKTLLASRLPGLLPEASE
AEALETAAITSISGRGLDLVRWRQRPYRAPHHTASAVALVGGGTHPRPGEISLAHNGVLFLDELPEWQRQTLEVLREPLE
SGMVTISRAARSVDFPARFQLVAAMNPCPCGWAGDSSGRCRCSSDTIGRYRSRISGPLLDRIDLHVEVPRLPPQALRSGN
VGEDSASVRTRVVAARVRQLARAGVPNAQLDQAQTDHHCRLQHDDQLLLERAIEHLQLSARSMHRILRVARTIADLDDSA
VIATRHLTEAIGYRKLDRAVGTASAA

Nucleotide

• Length: 1521 bp

>NTDB_id=1132430 CFBP2533_RS19845 WP_168959575.1 4705660..4707180(+) (comM) [Xanthomonas hortorum pv. pelargonii strain CFBP 2533 isolate Kemp 41]
ATGAGTCTGGCGCTGGTGCACAGCCGTGCCCGCGTGGGGGTGCATGCGCCTGAGGTCCGGGTGGAAGTGCATCTCTCCGG
CGGTCTTCCCTCCACCCAGATCGTGGGCCTGCCCGAGGCTGCAGTGCGCGAATCGCGCGAACGCGTGCGTGCCGCGCTGC
TGTGCGCACAGTTCGAATTCCCGGCACGGCGCATCACCATCAATCTGGCGCCGGCCGATTTGCCCAAGGAAGGCGGCCGC
TTCGACCTGCCAATCGCACTCGGCATTCTGGCCGCCAGCGGTCAGATCGACCGCCAGGCCTTGGCCGAGTACGAATTTCT
CGGCGAACTCGCCCTGACCGGCGAGTTGCGCGGTGTCGATGGCGTGCTGCCCGCCGCCCTGGCAGCCGCGCAGGCCGGCC
GTCGCCTGATCGTGCCGCTGGCCAACGGTGCCGAGGCCGCCATCGCCGGCCACGTCGAAGCCTTCACCGCGCGCACGCTG
CTGGAAGTCTGTGCCACGCTCAATGGCACCCAAAAGGCGCCCGCCGCCGAACTGGCGGTGCAGGCGCTCGGCGCGCGCGC
CCTGCCCGACATGGCCGACGTGCGCGGCCAACCGCATGCCCGCCGCGCGCTGGAAATTGCCGCAGCCGGCGGTCACCATT
TATTGCTGGTCGGTAGCCCTGGCTGCGGCAAGACCTTGCTCGCCTCGCGCCTGCCCGGCCTGCTGCCGGAAGCCAGCGAG
GCCGAGGCGCTGGAAACCGCCGCCATTACCTCCATCAGCGGTCGCGGACTGGATCTTGTGCGCTGGCGGCAACGCCCCTA
TCGGGCTCCGCACCACACCGCCAGCGCGGTCGCCTTGGTTGGCGGTGGCACACATCCACGCCCCGGCGAGATCTCGCTGG
CCCACAACGGCGTGTTGTTTCTGGACGAGTTGCCCGAGTGGCAACGCCAAACGCTGGAAGTGCTGCGCGAGCCGCTGGAA
TCGGGCATGGTCACCATCTCGCGCGCCGCGCGCAGTGTGGATTTCCCGGCAAGATTCCAATTGGTCGCGGCGATGAATCC
CTGTCCGTGCGGGTGGGCCGGCGATAGCAGCGGGCGTTGCCGTTGCAGCAGCGACACCATCGGCCGTTATCGCAGCCGGA
TCTCCGGGCCGCTGCTGGACCGGATCGATCTGCATGTCGAGGTCCCGCGCCTGCCGCCGCAGGCCCTGCGCAGCGGCAAC
GTCGGCGAGGACAGCGCCAGCGTGCGCACCCGCGTGGTCGCGGCACGCGTGCGGCAACTGGCACGTGCCGGCGTGCCCAA
CGCACAACTGGACCAAGCACAAACCGATCATCACTGCCGCCTGCAACACGACGATCAGCTGTTGCTGGAACGCGCTATCG
AACACCTGCAGCTGTCCGCACGCTCGATGCATCGCATCCTGCGCGTGGCACGCACCATCGCCGATCTCGACGACAGCGCG
GTCATTGCAACGCGTCATCTGACCGAAGCGATCGGCTACCGCAAACTGGATCGCGCGGTGGGCACGGCAAGCGCAGCCTA
A

Domains

Predicted by InterproScan.

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (190-394)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (402-494)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Vibrio cholerae strain A1552	56.522	100	0.565
comM	Haemophilus influenzae Rd KW20	55.842	99.802	0.557
comM	Glaesserella parasuis strain SC1401	54.851	99.802	0.547
comM	Vibrio campbellii strain DS40M4	54.15	100	0.542
comM	Legionella pneumophila str. Paris	52.495	99.012	0.52
comM	Legionella pneumophila strain ERS1305867	52.495	99.012	0.52
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	46.457	100	0.466