Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   H1X38_RS01000 Genome accession   NZ_LR822035
Coordinates   173216..173965 (+) Length   249 a.a.
NCBI ID   WP_014607893.1    Uniprot ID   -
Organism   Streptococcus thermophilus isolate STH_CIRM_1051     
Function   degradation of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 168216..178965
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H1X38_RS00975 (STHERMO_0170) - 168768..168938 (+) 171 WP_011680664.1 hypothetical protein -
  H1X38_RS00980 - 169025..169132 (+) 108 WP_011226802.1 LPXTG cell wall anchor domain-containing protein -
  H1X38_RS00985 (STHERMO_0171) - 169219..169959 (-) 741 WP_002949253.1 amino acid ABC transporter ATP-binding protein -
  H1X38_RS00990 (STHERMO_0172) - 169959..171509 (-) 1551 WP_014727298.1 ABC transporter substrate-binding protein/permease -
  H1X38_RS00995 (STHERMO_0173) - 171712..172566 (+) 855 WP_014621086.1 undecaprenyl-diphosphate phosphatase -
  H1X38_RS01000 (STHERMO_0174) mecA 173216..173965 (+) 750 WP_014607893.1 adaptor protein MecA Regulator
  H1X38_RS01005 (STHERMO_0175) - 173969..175126 (+) 1158 WP_014607894.1 glycosyltransferase family 4 protein -
  H1X38_RS01010 (STHERMO_0176) sufC 175286..176056 (+) 771 WP_002947634.1 Fe-S cluster assembly ATPase SufC -
  H1X38_RS01015 (STHERMO_0177) sufD 176093..177355 (+) 1263 WP_011680669.1 Fe-S cluster assembly protein SufD -
  H1X38_RS01020 (STHERMO_0178) - 177409..178641 (+) 1233 WP_014727299.1 cysteine desulfurase -

Sequence

Protein


Download         Length: 249 a.a.        Molecular weight: 29109.65 Da        Isoelectric Point: 4.0624

>NTDB_id=1131744 H1X38_RS01000 WP_014607893.1 173216..173965(+) (mecA) [Streptococcus thermophilus isolate STH_CIRM_1051]
MEMKQINETTLKIMITMEDLEEHGMELKDFLIPQEKTEEFFYTVMDELDLPDNFKNSGMLSFRVTPRKDRVDVFVTKTDL
KEDLDFNDLSDMEDYSGLSPEEFLKALEDNFMDKGDIEAHHKLEEHDKTLKEVDETMTGPAKEVAEETIREDYTHYVLAF
SDFDQVVTFAQGLKNVSVEGSELYKLGDVYYMTILLYLADEPDYYANNMYARFLEYANVADRTRPYLQEHATILMEEDAL
PVLQATKWS

Nucleotide


Download         Length: 750 bp        

>NTDB_id=1131744 H1X38_RS01000 WP_014607893.1 173216..173965(+) (mecA) [Streptococcus thermophilus isolate STH_CIRM_1051]
ATGGAAATGAAACAAATAAACGAGACAACTCTAAAAATCATGATTACCATGGAAGATCTTGAAGAACATGGTATGGAGCT
GAAAGATTTCTTGATTCCCCAGGAAAAAACAGAGGAATTTTTCTATACTGTCATGGATGAGTTGGACTTGCCTGATAACT
TTAAAAATAGTGGGATGTTGAGCTTCCGTGTCACGCCACGAAAGGATCGTGTGGATGTTTTTGTGACTAAAACAGATCTT
AAGGAAGACCTTGATTTCAATGATTTGTCAGATATGGAAGACTATTCAGGACTTTCTCCAGAAGAATTCCTCAAAGCTCT
TGAAGATAACTTTATGGATAAGGGAGATATTGAAGCCCACCATAAGCTCGAAGAGCATGATAAGACCTTGAAAGAGGTTG
ATGAGACTATGACAGGGCCGGCTAAGGAAGTGGCTGAGGAAACTATTCGTGAAGATTATACTCACTATGTCTTGGCTTTC
TCTGACTTTGATCAAGTAGTGACCTTTGCGCAAGGTTTGAAGAATGTGTCAGTGGAGGGTTCTGAACTTTATAAACTTGG
TGATGTCTACTATATGACTATCCTTCTTTACTTGGCTGATGAGCCTGATTATTACGCGAACAATATGTATGCGCGTTTTC
TTGAATATGCGAATGTGGCAGACCGAACACGTCCCTATCTACAAGAGCATGCAACAATCTTGATGGAAGAGGACGCCTTA
CCGGTATTACAAGCAACGAAATGGAGCTAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-242)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Streptococcus thermophilus LMD-9

98.394

100

0.984
  mecA Streptococcus thermophilus LMG 18311

98.394

100

0.984
  mecA Streptococcus mutans UA159

57.787

97.992

0.566
  mecA Streptococcus pneumoniae Rx1

45.783

100

0.458
  mecA Streptococcus pneumoniae D39

45.783

100

0.458
  mecA Streptococcus pneumoniae R6

45.783

100

0.458
  mecA Streptococcus pneumoniae TIGR4

45.783

100

0.458

Multiple sequence alignment