Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   H1W91_RS01025 Genome accession   NZ_LR822032
Coordinates   174177..174926 (+) Length   249 a.a.
NCBI ID   WP_022096529.1    Uniprot ID   -
Organism   Streptococcus thermophilus isolate STH_CIRM_1050     
Function   degradation of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 169177..179926
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H1W91_RS00995 (STHERMO_0181) - 169752..169922 (+) 171 WP_180476706.1 hypothetical protein -
  H1W91_RS01000 - 170009..170116 (+) 108 WP_002949251.1 LPXTG cell wall anchor domain-containing protein -
  H1W91_RS01005 (STHERMO_0182) - 170203..170943 (-) 741 WP_002949253.1 amino acid ABC transporter ATP-binding protein -
  H1W91_RS01010 (STHERMO_0183) - 170943..172493 (-) 1551 WP_022096528.1 ABC transporter substrate-binding protein/permease -
  H1W91_RS01015 (STHERMO_0184) - 172696..173550 (+) 855 WP_180476708.1 undecaprenyl-diphosphate phosphatase -
  H1W91_RS01020 - 173696..173911 (-) 216 WP_011226805.1 DUF3021 family protein -
  H1W91_RS01025 (STHERMO_0185) mecA 174177..174926 (+) 750 WP_022096529.1 adaptor protein MecA Regulator
  H1W91_RS01030 (STHERMO_0186) - 174930..176087 (+) 1158 WP_002947632.1 glycosyltransferase family 4 protein -
  H1W91_RS01035 (STHERMO_0187) sufC 176252..177022 (+) 771 WP_002947634.1 Fe-S cluster assembly ATPase SufC -
  H1W91_RS01040 (STHERMO_0188) sufD 177059..178321 (+) 1263 WP_180476710.1 Fe-S cluster assembly protein SufD -
  H1W91_RS01045 (STHERMO_0189) - 178375..179607 (+) 1233 WP_022096530.1 cysteine desulfurase -

Sequence


Protein


Download         Length: 249 a.a.        Molecular weight: 29156.76 Da        Isoelectric Point: 4.1121

>NTDB_id=1131559 H1W91_RS01025 WP_022096529.1 174177..174926(+) (mecA) [Streptococcus thermophilus isolate STH_CIRM_1050]
MEMKQINETTLKIMITMEDLEEHGMELKDFLIPQEKTEEFFYTVMDELDLPDNFKNSGMLSFRVTPRKDRVDVFVTKSDL
KEALDFNDLSDMEDYSGLSPEEFLKALEDNFMDKGDIEAHHKLEEHDKTLKEVDETMTEPAKKVAEETIREDYTHYVLAF
SDFDQVVTFAQGLKNVSVEGSEFYKLGDVYYMTILLYLADEPDYYANNMYARFLEYANVADRTRPYLQEHATILMEEDAL
PVLQATKWS

Nucleotide


Download         Length: 750 bp        

>NTDB_id=1131559 H1W91_RS01025 WP_022096529.1 174177..174926(+) (mecA) [Streptococcus thermophilus isolate STH_CIRM_1050]
ATGGAAATGAAACAAATAAACGAGACAACTCTAAAAATCATGATTACCATGGAAGATCTTGAAGAACATGGTATGGAGCT
GAAAGATTTCTTGATTCCCCAGGAAAAAACAGAGGAATTTTTCTATACTGTCATGGATGAGTTGGACTTGCCTGATAATT
TTAAAAATAGTGGGATGTTGAGCTTCCGTGTCACGCCACGAAAGGATCGTGTGGATGTTTTTGTGACTAAATCAGATCTT
AAGGAAGCCCTTGATTTCAATGATTTGTCAGATATGGAAGACTATTCAGGACTTTCTCCAGAAGAATTCCTCAAAGCTCT
TGAAGATAACTTTATGGATAAGGGAGATATTGAAGCCCACCATAAGCTCGAAGAGCATGATAAGACCTTGAAAGAGGTTG
ATGAGACTATGACAGAGCCGGCTAAGAAAGTGGCTGAGGAAACTATTCGTGAAGATTATACTCACTATGTCTTGGCTTTC
TCTGACTTTGATCAAGTAGTGACCTTTGCGCAAGGTTTGAAGAATGTGTCAGTGGAGGGTTCTGAATTTTATAAACTTGG
TGATGTCTACTATATGACTATCCTTCTTTACTTGGCTGATGAGCCTGATTATTACGCGAACAATATGTATGCGCGTTTTC
TTGAATATGCGAATGTGGCAGACCGAACACGTCCCTATCTACAAGAGCATGCAACAATCTTGATGGAAGAGGACGCCTTA
CCGGTATTACAAGCAACGAAATGGAGCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Streptococcus thermophilus LMG 18311

99.598

100

0.996

  mecA Streptococcus thermophilus LMD-9

98.795

100

0.988

  mecA Streptococcus mutans UA159

57.787

97.992

0.566

  mecA Streptococcus pneumoniae Rx1

46.586

100

0.466

  mecA Streptococcus pneumoniae D39

46.586

100

0.466

  mecA Streptococcus pneumoniae R6

46.586

100

0.466

  mecA Streptococcus pneumoniae TIGR4

46.586

100

0.466


Multiple sequence alignment