Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   H1W95_RS09775 Genome accession   NZ_LR822030
Coordinates   1887491..1888726 (+) Length   411 a.a.
NCBI ID   WP_180483428.1    Uniprot ID   A0AAU9H919
Organism   Streptococcus thermophilus isolate STH_CIRM_1046     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1882491..1893726
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H1W95_RS09745 (STHERMO_2204) - 1882959..1885565 (+) 2607 WP_041827400.1 YfhO family protein -
  H1W95_RS09765 (STHERMO_2205) - 1886108..1886791 (-) 684 WP_011226711.1 YoaK family protein -
  H1W95_RS09770 (STHERMO_2206) rlmH 1886807..1887286 (-) 480 WP_002952297.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  H1W95_RS09775 (STHERMO_2207) htrA 1887491..1888726 (+) 1236 WP_180483428.1 S1C family serine protease Regulator
  H1W95_RS09780 (STHERMO_2208) spo0J 1888792..1889559 (+) 768 WP_002952299.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 411 a.a.        Molecular weight: 42927.30 Da        Isoelectric Point: 4.7061

>NTDB_id=1131493 H1W95_RS09775 WP_180483428.1 1887491..1888726(+) (htrA) [Streptococcus thermophilus isolate STH_CIRM_1046]
MKKFNWKKIVVPIAMLIIGLLGGLLGAFILLTAAGVSFTNTTDTGVKTVKTVYTNITDTTKAVKKVQNAVVSVINYQEGS
SSDSLNDLYGRIFGGGDSSDSSQENSKDSDGLQVAGEGSGVIYKKDGKEAYIVTNNHVVDGAKKLEIMLSDGSKITGELV
GKDTYSDLAVVKVSSDKITTVAEFADSNSLTVGEKAIAIGSPLGTEYANSVIEGIVSSLSRTITMQNDNGETVSTNAIQT
DAAINPGNSGGALVNIEGQVIGINSSKISSTSAVAGSAVEGMGFAIPSNDVVEIINQLEKDGKVTRPALGISIADLNSLS
SSATSKLDLPDEVKSGVVVGSVQKGMPADGKLQEYDVITEIDGKKISSKTDIQTNLYSHSIGDTIKVTFYRGKDKKTVDL
KLTKSTEDISD

Nucleotide


Download         Length: 1236 bp        

>NTDB_id=1131493 H1W95_RS09775 WP_180483428.1 1887491..1888726(+) (htrA) [Streptococcus thermophilus isolate STH_CIRM_1046]
ATGAAAAAATTTAACTGGAAGAAAATAGTCGTGCCAATTGCAATGCTAATTATTGGCTTACTAGGTGGTTTACTTGGTGC
CTTTATCCTACTAACAGCAGCCGGGGTATCTTTTACCAATACAACAGATACTGGAGTAAAAACGGTTAAGACCGTCTACA
CCAATATAACAGATACAACTAAGGCTGTTAAGAAAGTACAAAATGCCGTTGTTTCTGTCATCAATTATCAAGAAGGTTCA
TCTTCAGATTCTCTAAATGACCTTTATGGCCGTATCTTTGGCGGAGGGGACAGTTCTGATTCTAGCCAAGAAAATTCAAA
AGATTCAGATGGTCTGCAGGTCGCTGGTGAAGGTTCTGGAGTCATCTATAAAAAAGATGGCAAAGAAGCCTACATCGTAA
CCAATAACCACGTTGTCGATGGGGCTAAAAAACTTGAAATCATGCTTTCGGATGGTTCGAAAATTACTGGTGAACTTGTT
GGTAAAGACACTTACTCTGACCTAGCAGTTGTCAAAGTATCTTCAGATAAAATAACAACTGTTGCAGAATTTGCAGACTC
AAACTCCCTTACTGTTGGTGAAAAAGCAATTGCTATCGGTAGCCCACTTGGTACCGAATACGCCAACTCAGTAATAGAAG
GAATCGTTTCTAGCCTTAGCCGTACTATAACGATGCAAAACGATAATGGTGAAACTGTATCAACAAACGCTATCCAAACA
GATGCAGCCATTAACCCTGGTAACTCTGGTGGTGCCCTAGTCAATATTGAAGGACAAGTTATCGGTATTAACTCAAGTAA
AATTTCATCAACGTCTGCAGTCGCTGGTAGTGCTGTTGAAGGTATGGGGTTTGCCATTCCATCAAACGATGTTGTTGAAA
TCATCAATCAATTAGAAAAAGATGGTAAAGTTACACGACCAGCACTAGGGATCTCAATAGCAGATCTTAATAGCCTTTCT
AGCAGCGCAACTTCTAAATTAGATTTACCAGATGAGGTCAAATCCGGTGTTGTTGTCGGTAGTGTTCAGAAAGGTATGCC
AGCTGACGGTAAACTTCAAGAATATGATGTTATCACTGAGATTGATGGTAAGAAAATCAGCTCAAAAACTGATATTCAAA
CCAATCTTTACAGCCATAGTATCGGAGATACTATCAAGGTAACCTTCTATCGTGGTAAAGATAAGAAAACTGTAGATCTT
AAATTAACAAAATCTACAGAAGACATATCTGATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

59.854

100

0.599

  htrA Streptococcus gordonii str. Challis substr. CH1

57.143

98.783

0.564

  htrA Streptococcus mitis NCTC 12261

53.545

99.513

0.533

  htrA Streptococcus pneumoniae TIGR4

53.301

99.513

0.53

  htrA Streptococcus pneumoniae D39

53.301

99.513

0.53

  htrA Streptococcus pneumoniae Rx1

53.301

99.513

0.53

  htrA Streptococcus pneumoniae R6

53.301

99.513

0.53


Multiple sequence alignment