Detailed information NTG1131291

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: H1W98_RS07070
• Genome accession: NZ_LR822026
• Coordinates: 1360378..1361304 (-)
• Length: 308 a.a.
• NCBI ID: WP_180482512.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus isolate STH_CIRM_967
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1355378..1366304

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H1W98_RS07040 (STHERMO_1601)	-	1355453..1356247 (-)	795	WP_180482515.1	HAD-IIB family hydrolase	-
H1W98_RS07045 (STHERMO_1602)	-	1356432..1356809 (+)	378	WP_180482514.1	GntR family transcriptional regulator	-
H1W98_RS07050 (STHERMO_1603)	-	1356814..1357514 (+)	701	Protein_1331	ABC transporter ATP-binding protein	-
H1W98_RS07055 (STHERMO_1605)	-	1357526..1358311 (+)	786	WP_180482513.1	ABC transporter permease	-
H1W98_RS07060 (STHERMO_1606)	amiF	1358364..1359290 (-)	927	WP_179972088.1	ATP-binding cassette domain-containing protein	Regulator
H1W98_RS07065 (STHERMO_1607)	amiE	1359283..1360368 (-)	1086	WP_179972089.1	ABC transporter ATP-binding protein	Regulator
H1W98_RS07070 (STHERMO_1608)	amiD	1360378..1361304 (-)	927	WP_180482512.1	oligopeptide ABC transporter permease OppC	Regulator
H1W98_RS07075 (STHERMO_1609)	amiC	1361304..1362797 (-)	1494	WP_164135541.1	ABC transporter permease	Regulator
H1W98_RS07080 (STHERMO_1610)	amiA3	1362863..1364839 (-)	1977	WP_180482511.1	peptide ABC transporter substrate-binding protein	Regulator
H1W98_RS07085 (STHERMO_1611)	-	1365074..1365263 (-)	190	Protein_1338	IS3 family transposase	-
H1W98_RS11230 (STHERMO_1613)	-	1365260..1365684 (-)	425	Protein_1339	ATP-binding cassette domain-containing protein	-
H1W98_RS11235	-	1365724..1366173 (-)	450	Protein_1340	TatD family hydrolase	-

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34614.77 Da
• Isoelectric Point: 9.7054

>NTDB_id=1131291 H1W98_RS07070 WP_180482512.1 1360378..1361304(-) (amiD) [Streptococcus thermophilus isolate STH_CIRM_967]
MASIDKSKFQFVKRDDFASETIDAPSYSYWKSVMRQFFKKKSTVVMLGILIAIVLMSFIYPMFSKFDFNDVSKVNDFSLR
YVHPNAQYWFGTDGNGKSLFDSVWFGARNSILIAVIATLLNVIIGSLVGAVWGISKTFDMIMMEIYNIISNIPPLLVIIV
LTYSLGAGFWNMIFAMTVTGWIGIAYTIRIQIMRYRDLEYNLASRNLGTPTAKIVIKNIMPQLVSVIVTMASQLLPGFIS
YEAFLSYFGLGLPVTTPSLGRLISDYAQNVTVNAYLFWIPLTTLILVSLALFIVGQNLADASDPRTHR

Nucleotide

• Length: 927 bp

>NTDB_id=1131291 H1W98_RS07070 WP_180482512.1 1360378..1361304(-) (amiD) [Streptococcus thermophilus isolate STH_CIRM_967]
ATGGCTTCAATTGATAAAAGTAAGTTCCAATTTGTAAAGCGCGATGATTTTGCCTCTGAAACAATTGATGCACCGTCTTA
CTCATACTGGAAATCAGTGATGCGTCAATTTTTTAAAAAGAAGTCAACAGTTGTAATGTTGGGAATCTTGATTGCTATTG
TTTTGATGAGTTTCATCTACCCAATGTTTTCTAAATTTGACTTCAACGATGTCTCAAAAGTAAATGATTTCAGTTTGCGT
TATGTACATCCAAACGCTCAATACTGGTTCGGTACTGACGGTAATGGTAAGTCTCTATTTGACAGTGTTTGGTTTGGGGC
TCGTAATTCTATCCTTATCGCTGTTATCGCTACCCTCCTGAATGTTATAATTGGTTCGCTTGTAGGTGCTGTTTGGGGGA
TTTCTAAGACCTTCGATATGATTATGATGGAAATCTACAACATCATCTCAAATATTCCCCCTCTCCTTGTAATTATCGTC
TTGACTTACTCATTAGGTGCTGGTTTCTGGAATATGATTTTTGCCATGACCGTAACAGGTTGGATTGGTATTGCCTACAC
AATCCGTATTCAAATCATGCGTTATCGTGATTTGGAGTATAACTTGGCTTCTCGCAATTTGGGAACACCAACGGCTAAGA
TTGTGATTAAAAATATCATGCCACAACTTGTGTCAGTTATTGTAACCATGGCTAGTCAACTTTTGCCAGGATTTATCTCT
TATGAGGCCTTCCTTTCATACTTTGGTTTGGGTCTTCCTGTTACTACGCCTAGTCTTGGTCGTTTGATTTCAGACTATGC
ACAGAACGTTACAGTCAATGCCTATCTCTTCTGGATTCCATTGACTACCTTGATTCTTGTTTCTCTTGCCCTCTTTATTG
TTGGTCAAAACTTAGCGGATGCTAGTGACCCACGTACGCATAGATAG

Domains

Predicted by InterproScan.

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-71)

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (125-306)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus thermophilus LMG 18311	98.052	100	0.981
amiD	Streptococcus thermophilus LMD-9	98.052	100	0.981
amiD	Streptococcus salivarius strain HSISS4	95.455	100	0.955