Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   H1W98_RS01020 Genome accession   NZ_LR822026
Coordinates   184308..185057 (+) Length   249 a.a.
NCBI ID   WP_100273348.1    Uniprot ID   -
Organism   Streptococcus thermophilus isolate STH_CIRM_967     
Function   degradation of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 179308..190057
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H1W98_RS10510 (STHERMO_0193) - 179834..180235 (+) 402 WP_232086870.1 LPXTG cell wall anchor domain-containing protein -
  H1W98_RS01000 (STHERMO_0194) - 180323..181063 (-) 741 WP_179972549.1 amino acid ABC transporter ATP-binding protein -
  H1W98_RS01005 (STHERMO_0195) - 181063..182613 (-) 1551 WP_179972550.1 ABC transporter substrate-binding protein/permease -
  H1W98_RS01010 (STHERMO_0197) - 182817..183671 (+) 855 WP_011680666.1 undecaprenyl-diphosphate phosphatase -
  H1W98_RS01015 - 183723..184031 (-) 309 WP_306496352.1 DUF3021 family protein -
  H1W98_RS01020 (STHERMO_0198) mecA 184308..185057 (+) 750 WP_100273348.1 adaptor protein MecA Regulator
  H1W98_RS01025 (STHERMO_0199) - 185061..186218 (+) 1158 WP_179972551.1 glycosyltransferase family 4 protein -
  H1W98_RS01030 (STHERMO_0200) - 186258..187507 (-) 1250 Protein_163 ISL3 family transposase -
  H1W98_RS01035 (STHERMO_0201) sufC 187798..188568 (+) 771 WP_179972552.1 Fe-S cluster assembly ATPase SufC -
  H1W98_RS01040 (STHERMO_0202) sufD 188605..189867 (+) 1263 WP_179972553.1 Fe-S cluster assembly protein SufD -

Sequence

Protein


Download         Length: 249 a.a.        Molecular weight: 29116.68 Da        Isoelectric Point: 4.0182

>NTDB_id=1131255 H1W98_RS01020 WP_100273348.1 184308..185057(+) (mecA) [Streptococcus thermophilus isolate STH_CIRM_967]
MEMKQISETTLKIMITMEDLEEHGMELKDFLIPQEKTEEFFYTVMDELDLPDNFKNSGMLSFRVTPRKDRVDVFVTKSDL
KEDLDFNDLSDMEDYSGLSPEEFLKALEDNFMDKGDIEAHHKLEELEKTLKEVDETMTDPAKEVAEETIREDYTHYVLAF
SDFDQVVTFAQGLKNVSVEGSELYKLGDVYYMTILLYLADEPDYYANNMYARFLEYANVADRTRPYLQEHATILMEEDAL
PVLQATKWS

Nucleotide


Download         Length: 750 bp        

>NTDB_id=1131255 H1W98_RS01020 WP_100273348.1 184308..185057(+) (mecA) [Streptococcus thermophilus isolate STH_CIRM_967]
ATGGAAATGAAACAAATAAGCGAGACAACTCTAAAAATCATGATTACCATGGAAGATCTTGAAGAACATGGTATGGAGCT
GAAAGATTTCTTGATTCCCCAGGAAAAAACAGAGGAATTTTTCTATACTGTCATGGATGAGTTGGACTTACCTGATAACT
TTAAAAATAGTGGGATGTTGAGCTTCCGTGTCACGCCACGAAAGGATCGTGTGGATGTTTTTGTGACTAAATCAGATCTT
AAGGAAGACCTTGATTTCAATGATTTGTCAGATATGGAAGACTATTCAGGACTTTCTCCAGAAGAATTCCTCAAAGCTCT
TGAAGATAACTTTATGGATAAGGGAGATATTGAAGCCCACCATAAGCTCGAAGAGCTTGAAAAGACCTTGAAAGAGGTTG
ATGAGACTATGACAGATCCGGCTAAGGAAGTGGCTGAGGAAACTATTCGTGAAGATTATACTCACTATGTCTTGGCTTTC
TCTGACTTTGATCAAGTAGTGACCTTTGCGCAAGGTTTGAAGAATGTGTCAGTGGAGGGTTCTGAACTTTATAAACTTGG
TGATGTCTACTATATGACTATCCTTCTTTACTTGGCTGATGAGCCTGATTATTACGCGAACAATATGTATGCGCGTTTTC
TTGAATATGCGAATGTGGCAGACCGAACACGTCCCTATCTACAAGAGCATGCAACAATCTTGATGGAAGAGGACGCCTTA
CCGGTATTACAAGCAACGAAATGGAGCTAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-242)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Streptococcus thermophilus LMD-9

98.394

100

0.984
  mecA Streptococcus thermophilus LMG 18311

97.59

100

0.976
  mecA Streptococcus mutans UA159

59.016

97.992

0.578
  mecA Streptococcus pneumoniae Rx1

46.988

100

0.47
  mecA Streptococcus pneumoniae D39

46.988

100

0.47
  mecA Streptococcus pneumoniae R6

46.988

100

0.47
  mecA Streptococcus pneumoniae TIGR4

46.988

100

0.47

Multiple sequence alignment