Detailed information NTG1130978

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: H0511_RS06715
• Genome accession: NZ_LR822017
• Coordinates: 1317108..1318034 (-)
• Length: 308 a.a.
• NCBI ID: WP_179973880.1
• Uniprot ID: A0A8D6UAY9
• Organism: Streptococcus thermophilus isolate STH_CIRM_336
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1312108..1323034

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H0511_RS06685 (STHERMO_1498)	-	1312186..1312980 (-)	795	WP_179973877.1	HAD-IIB family hydrolase	-
H0511_RS06690 (STHERMO_1499)	-	1313164..1313541 (+)	378	WP_179973878.1	GntR family transcriptional regulator	-
H0511_RS06695 (STHERMO_1500)	-	1313546..1314244 (+)	699	WP_011226301.1	ABC transporter ATP-binding protein	-
H0511_RS06700 (STHERMO_1501)	-	1314256..1315041 (+)	786	WP_179973879.1	ABC transporter permease	-
H0511_RS06705 (STHERMO_1502)	amiF	1315091..1316020 (-)	930	WP_002951426.1	ATP-binding cassette domain-containing protein	Regulator
H0511_RS06710 (STHERMO_1503)	amiE	1316013..1317098 (-)	1086	WP_179970968.1	ABC transporter ATP-binding protein	Regulator
H0511_RS06715 (STHERMO_1504)	amiD	1317108..1318034 (-)	927	WP_179973880.1	oligopeptide ABC transporter permease OppC	Regulator
H0511_RS06720 (STHERMO_1505)	amiC	1318034..1319527 (-)	1494	WP_164135541.1	ABC transporter permease	Regulator
H0511_RS06725 (STHERMO_1506)	amiA3	1319593..1321569 (-)	1977	WP_179973881.1	peptide ABC transporter substrate-binding protein	Regulator
H0511_RS06730 (STHERMO_1507)	-	1321804..1321996 (-)	193	Protein_1291	IS3 family transposase	-
H0511_RS10475 (STHERMO_1509)	-	1321990..1322414 (-)	425	Protein_1292	ATP-binding cassette domain-containing protein	-
H0511_RS10480	-	1322454..1322903 (-)	450	Protein_1293	TatD family hydrolase	-

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34654.87 Da
• Isoelectric Point: 9.7054

>NTDB_id=1130978 H0511_RS06715 WP_179973880.1 1317108..1318034(-) (amiD) [Streptococcus thermophilus isolate STH_CIRM_336]
MASIDKSKFQFVKRDDFASETIDAPSYSYWKSVMRQFFKKKSTVVMLGILIAIVLMSFIYPMFSKFDFNDVSKVNDFSLR
YVHPNAQYWFGTDGNGKSLFDSVWFGARNSILIAVIATLLNVIIGLLVGAVWGISKTFDMIMMEIYNIISNIPPLLVIIV
LTYSLGAGFWNMIFAMTVTGWIGIAYTIRIQIMRYRDLEYNLASRNLGTPTAKIVIKNIMPQLVSVIVTMASQLLPGFIS
YEAFLSYFGLGLPVTTPSLGRLISDYAQNVTVNAYLFWIPLTTLILVSLALFIIGQNLADASDPRTHR

Nucleotide

• Length: 927 bp

>NTDB_id=1130978 H0511_RS06715 WP_179973880.1 1317108..1318034(-) (amiD) [Streptococcus thermophilus isolate STH_CIRM_336]
ATGGCTTCAATTGATAAAAGTAAGTTCCAATTTGTAAAGCGCGATGATTTTGCCTCTGAAACAATTGATGCACCGTCTTA
CTCATACTGGAAATCAGTGATGCGTCAATTTTTTAAAAAGAAGTCAACAGTTGTAATGTTGGGAATCTTGATTGCTATTG
TTTTGATGAGTTTCATCTACCCAATGTTTTCTAAATTTGACTTCAACGATGTCTCAAAAGTAAATGATTTCAGTTTGCGT
TATGTACATCCAAACGCTCAATACTGGTTCGGTACTGACGGTAATGGTAAGTCTCTATTTGACAGTGTTTGGTTTGGGGC
TCGTAATTCTATCCTTATCGCTGTTATCGCTACCCTCCTGAATGTTATAATTGGTTTGCTTGTAGGTGCTGTTTGGGGGA
TTTCTAAGACCTTCGATATGATTATGATGGAAATCTACAACATCATCTCAAATATTCCCCCTCTCCTTGTAATTATCGTC
TTGACTTACTCATTAGGTGCTGGTTTCTGGAATATGATTTTTGCCATGACCGTAACAGGTTGGATTGGTATTGCCTACAC
AATCCGTATTCAAATCATGCGTTATCGTGATTTGGAGTATAACTTGGCTTCTCGCAATTTGGGAACACCAACGGCTAAGA
TTGTGATTAAAAATATCATGCCACAACTTGTGTCAGTTATTGTAACCATGGCTAGTCAACTTTTGCCAGGATTTATCTCT
TATGAGGCCTTCCTTTCATACTTTGGTTTGGGTCTTCCTGTTACTACGCCTAGTCTTGGTCGTTTGATTTCAGACTATGC
ACAGAACGTTACAGTCAATGCCTATCTCTTCTGGATTCCATTGACTACCTTGATTCTTGTTTCTCTTGCCCTCTTTATTA
TTGGTCAAAACTTAGCGGATGCTAGTGACCCACGTACGCATAGATAG

Domains

Predicted by InterproScan.

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-71)

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (125-306)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus thermophilus LMG 18311	98.052	100	0.981
amiD	Streptococcus thermophilus LMD-9	98.052	100	0.981
amiD	Streptococcus salivarius strain HSISS4	95.455	100	0.955