Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   H0502_RS07320 Genome accession   NZ_LR822013
Coordinates   1458328..1459077 (-) Length   249 a.a.
NCBI ID   WP_179970775.1    Uniprot ID   -
Organism   Streptococcus thermophilus isolate STH_CIRM_32     
Function   degradation of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 1453328..1464077
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H0502_RS07300 (STHERMO_1686) - 1453652..1454884 (-) 1233 WP_011225367.1 cysteine desulfurase -
  H0502_RS07305 (STHERMO_1687) sufD 1454938..1456200 (-) 1263 WP_002947640.1 Fe-S cluster assembly protein SufD -
  H0502_RS07310 (STHERMO_1688) sufC 1456237..1457007 (-) 771 WP_002947634.1 Fe-S cluster assembly ATPase SufC -
  H0502_RS07315 (STHERMO_1689) - 1457167..1458324 (-) 1158 WP_167401408.1 glycosyltransferase family 4 protein -
  H0502_RS07320 (STHERMO_1690) mecA 1458328..1459077 (-) 750 WP_179970775.1 adaptor protein MecA Regulator
  H0502_RS07325 - 1459361..1459558 (+) 198 WP_224103664.1 DUF3021 family protein -
  H0502_RS07330 (STHERMO_1691) - 1459704..1460558 (-) 855 WP_041828107.1 undecaprenyl-diphosphate phosphatase -
  H0502_RS07335 (STHERMO_1692) - 1460761..1462311 (+) 1551 WP_014607891.1 ABC transporter substrate-binding protein/permease -
  H0502_RS07340 (STHERMO_1693) - 1462311..1463051 (+) 741 WP_002949253.1 amino acid ABC transporter ATP-binding protein -
  H0502_RS10470 (STHERMO_1694) - 1463138..1463245 (-) 108 WP_011226802.1 LPXTG cell wall anchor domain-containing protein -
  H0502_RS07350 (STHERMO_1695) - 1463332..1463502 (-) 171 WP_011680664.1 hypothetical protein -

Sequence


Protein


Download         Length: 249 a.a.        Molecular weight: 29147.66 Da        Isoelectric Point: 4.0659

>NTDB_id=1130804 H0502_RS07320 WP_179970775.1 1458328..1459077(-) (mecA) [Streptococcus thermophilus isolate STH_CIRM_32]
MEMKQINETTLKIMITMEDLEEHGMELKDFLISQEKTEEFFYTVMDELDLPDNFKNSGMLSFRVTPRKDRVDVFVTKSDL
KEALDFNDLSDMEDYSGLSPEEFLKALEDNFMDKGDIEAHHKLEEHDKTLKEVDETMTEPAKEVAEETIREDYTHYVLAF
SDFDQVVTFAQGLKNVSVEGSEFYKLGDVYYMTILLYLADEPDYYANNMYARFLEYANVADRTRPYLQEHATILMEEDAL
PVLQATKWS

Nucleotide


Download         Length: 750 bp        

>NTDB_id=1130804 H0502_RS07320 WP_179970775.1 1458328..1459077(-) (mecA) [Streptococcus thermophilus isolate STH_CIRM_32]
ATGGAAATGAAACAAATAAACGAGACAACTCTAAAAATCATGATTACCATGGAAGATCTTGAAGAACATGGTATGGAGCT
GAAAGATTTCTTGATTTCCCAGGAAAAAACAGAGGAATTTTTCTATACTGTCATGGATGAGTTGGACTTGCCTGATAACT
TTAAAAATAGTGGGATGTTGAGCTTCCGTGTCACGCCACGAAAGGATCGTGTGGATGTTTTTGTGACTAAATCAGATCTT
AAGGAAGCCCTTGATTTCAATGATTTGTCAGATATGGAAGACTATTCAGGACTTTCTCCAGAAGAATTCCTCAAAGCTCT
TGAAGATAACTTTATGGATAAGGGAGATATTGAAGCCCACCATAAGCTCGAAGAGCATGATAAGACCTTGAAAGAGGTTG
ATGAGACTATGACAGAGCCGGCTAAGGAAGTGGCTGAGGAAACTATTCGTGAAGATTATACTCACTATGTCTTGGCTTTC
TCTGACTTTGATCAAGTAGTGACCTTTGCGCAAGGTTTGAAGAATGTGTCAGTGGAGGGTTCTGAATTTTATAAACTTGG
TGATGTCTACTATATGACTATCCTTCTTTACTTGGCTGATGAGCCTGATTATTACGCGAACAATATGTATGCGCGTTTTC
TTGAATATGCGAATGTGGCAGACCGAACACGTCCCTATCTACAAGAGCATGCAACAATCTTGATGGAAGAGGACGCCTTA
CCGGTATTACAAGCAACGAAATGGAGCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Streptococcus thermophilus LMG 18311

99.598

100

0.996

  mecA Streptococcus thermophilus LMD-9

98.795

100

0.988

  mecA Streptococcus mutans UA159

56.967

97.992

0.558

  mecA Streptococcus pneumoniae Rx1

45.783

100

0.458

  mecA Streptococcus pneumoniae D39

45.783

100

0.458

  mecA Streptococcus pneumoniae R6

45.783

100

0.458

  mecA Streptococcus pneumoniae TIGR4

45.783

100

0.458


Multiple sequence alignment