Detailed information NTG1130528

Bioinformatically predicted

Overview

• Name: comA
• Type: Regulator
• Locus tag: H0501_RS10510
• Genome accession: NZ_LR822008
• Coordinates: 274411..275244 (+)
• Length: 277 a.a.
• NCBI ID: WP_269149495.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus isolate STH_CIRM_18
• Function: processing and transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 269411..280244

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H0501_RS01485 (STHERMO_0291)	-	269849..270358 (+)	510	WP_014607952.1	tRNA (cytidine(34)-2'-O)-methyltransferase	-
H0501_RS01490 (STHERMO_0292)	-	270670..271227 (+)	558	WP_002949523.1	ECF transporter S component	-
H0501_RS01495 (STHERMO_0293)	-	271230..271880 (+)	651	WP_011225447.1	phosphatase PAP2 family protein	-
H0501_RS01500 (STHERMO_0294)	comR	272075..272974 (+)	900	WP_014607953.1	helix-turn-helix domain-containing protein	Regulator
H0501_RS10500	-	273212..273643 (+)	432	Protein_247	cysteine peptidase family C39 domain-containing protein	-
H0501_RS10505	-	273673..274389 (+)	717	Protein_248	ABC transporter transmembrane domain-containing protein	-
H0501_RS10510 (STHERMO_0299)	comA	274411..275244 (+)	834	WP_269149495.1	ATP-binding cassette domain-containing protein	Regulator
H0501_RS01510 (STHERMO_0300)	-	275352..275669 (+)	318	WP_179970762.1	DUF805 domain-containing protein	-
H0501_RS10340	-	275885..276232 (-)	348	WP_232085744.1	DUF4153 domain-containing protein	-
H0501_RS09785 (STHERMO_0303)	-	276157..276957 (-)	801	WP_232086444.1	urease cluster protein	-
H0501_RS01520 (STHERMO_0304)	-	277458..277973 (+)	516	WP_002949547.1	AmiS/UreI family transporter	-
H0501_RS01525 (STHERMO_0305)	-	277998..278300 (+)	303	WP_002886558.1	urease subunit gamma	-
H0501_RS01530 (STHERMO_0306)	-	278312..278623 (+)	312	WP_002886559.1	urease subunit beta	-

Sequence

Protein

• Length: 277 a.a.
• Molecular weight: 30866.48 Da
• Isoelectric Point: 8.8523

>NTDB_id=1130528 H0501_RS10510 WP_269149495.1 274411..275244(+) (comA) [Streptococcus thermophilus isolate STH_CIRM_18]
MITYSMLLNYFTTPLINIINLQSKIQQAKVANNCLQEVYVVNKEEKGQLKDLSFKQLDLKGVSHRFRYQQETLHNIDLTI
NKGEKIALMGQSSSGKTTLAKILSGYYTKSSGHVSLDKASISQAELRQLVTYVPQQTYVFTGTILENLLLGLEGEVDGHF
ILKVCEQADILADIQKMPLGFQTQVSEDGGLSGGQKQRLAIARALLSNQPILIFDEATSGLDRKTESRVMANLSELTRTM
IFIAHRSSVYQHVSRVVTMANGKLEAASTNFNPFQFI

Nucleotide

• Length: 834 bp

>NTDB_id=1130528 H0501_RS10510 WP_269149495.1 274411..275244(+) (comA) [Streptococcus thermophilus isolate STH_CIRM_18]
TTGATTACCTATAGTATGTTGCTTAATTATTTTACGACTCCTTTAATTAATATTATCAATCTTCAATCTAAGATTCAGCA
AGCCAAGGTAGCCAATAATTGTCTTCAAGAAGTTTATGTTGTGAATAAGGAAGAAAAAGGTCAACTCAAAGATTTATCCT
TTAAACAATTAGACTTAAAAGGTGTTAGTCATCGTTTCAGATACCAACAAGAGACACTTCATAATATTGATTTGACGATT
AATAAGGGAGAGAAAATCGCCCTCATGGGTCAGAGTAGTTCTGGGAAAACGACTTTAGCGAAGATTTTGTCAGGTTATTA
CACAAAATCTAGTGGTCATGTAAGCTTAGACAAAGCTTCTATTAGCCAAGCGGAGTTGCGCCAGTTGGTGACCTATGTTC
CACAACAGACCTATGTGTTTACGGGAACAATATTAGAAAATCTATTGTTAGGCCTTGAAGGAGAAGTTGATGGTCATTTT
ATTCTGAAAGTCTGTGAACAAGCCGATATTTTGGCTGATATTCAAAAGATGCCCCTAGGTTTTCAGACCCAAGTATCTGA
AGATGGAGGTCTGTCTGGCGGTCAAAAACAAAGATTAGCTATAGCAAGGGCTCTCTTGTCCAATCAACCAATCTTGATTT
TTGATGAAGCTACAAGTGGTCTGGACAGGAAAACTGAAAGTAGAGTAATGGCCAATCTTTCTGAACTGACACGAACAATG
ATTTTCATTGCTCACCGTAGCAGTGTCTACCAACATGTCAGTCGTGTAGTGACTATGGCAAATGGGAAGCTTGAAGCAGC
TAGTACCAACTTCAATCCATTCCAGTTCATTTAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (73-219)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Streptococcus mitis SK321	50	98.195	0.491
comA	Streptococcus mitis NCTC 12261	50	98.195	0.491
comA	Streptococcus pneumoniae D39	49.632	98.195	0.487
comA	Streptococcus pneumoniae R6	49.632	98.195	0.487
comA	Streptococcus pneumoniae Rx1	49.632	98.195	0.487
comA	Streptococcus gordonii str. Challis substr. CH1	49.632	98.195	0.487
comA	Streptococcus pneumoniae TIGR4	49.265	98.195	0.484
comA/nlmT	Streptococcus mutans UA159	45.956	98.195	0.451