Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA3   Type   Regulator
Locus tag   FQT45_RS02210 Genome accession   NZ_LR595858
Coordinates   415777..417759 (+) Length   660 a.a.
NCBI ID   WP_077322871.1    Uniprot ID   A0A4U9XJL2
Organism   Streptococcus pseudoporcinus strain NCTC10228     
Function   binding to XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 410777..422759
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FQT45_RS10615 - 411035..411577 (+) 543 WP_223837129.1 SdrD B-like domain-containing protein -
  FQT45_RS02195 (NCTC10228_00444) - 411694..412836 (-) 1143 WP_370737000.1 D-alanyl-D-alanine carboxypeptidase family protein -
  FQT45_RS02200 (NCTC10228_00445) pbp3 412953..414167 (-) 1215 WP_077322873.1 D-alanyl-D-alanine carboxypeptidase PBP3 -
  FQT45_RS02205 (NCTC10228_00446) pbp3 414214..415452 (-) 1239 WP_077322872.1 D-alanyl-D-alanine carboxypeptidase PBP3 -
  FQT45_RS02210 (NCTC10228_00447) amiA3 415777..417759 (+) 1983 WP_077322871.1 peptide ABC transporter substrate-binding protein Regulator
  FQT45_RS02215 (NCTC10228_00448) amiC 417829..419328 (+) 1500 WP_007893616.1 ABC transporter permease Regulator
  FQT45_RS02220 (NCTC10228_00449) amiD 419328..420254 (+) 927 WP_007893576.1 oligopeptide ABC transporter permease OppC Regulator
  FQT45_RS02225 (NCTC10228_00450) amiE 420263..421333 (+) 1071 WP_077322870.1 ABC transporter ATP-binding protein Regulator
  FQT45_RS02230 (NCTC10228_00451) amiF 421326..422249 (+) 924 WP_077322869.1 ABC transporter ATP-binding protein Regulator

Sequence

Protein


Download         Length: 660 a.a.        Molecular weight: 73423.90 Da        Isoelectric Point: 7.1812

>NTDB_id=1128469 FQT45_RS02210 WP_077322871.1 415777..417759(+) (amiA3) [Streptococcus pseudoporcinus strain NCTC10228]
MKNGKWLAAIGIAILSVSTLAACSNGSSKDSKSKNYSYVYATDPDTLDYLVSGRSTTSEIIQNSVDGLMEYDNMGNLVPS
VAKSWTVSKDGLTYTYKIRKDSKWYTADGEEYANVTANDFVAGLKHAADKGSDALYLVQDSIKGLGDYVEGKTKDFSTVG
VKAIDKNTLQYTLNKPESFWNSKLTYGILSPVNADFLKSKGKDFGKASDPSSILYNGPFLISSLTSKSSIEFVKNENYWD
KKDVHVDGVQLTYYDGQDQESLFRNFDKGAYSAARLFPTTPSYKKVKKNYGDNIIYAPQKSNTYYATFNLNRTAYDHTKK
TSDKQKDDTRKAVLNKDFRQALTFGFNRKSYTAQTAGEDGAGKSLRNTLVPPAFVQIDGHDFGKTVEKELANYGEQWKDV
NLADAQDGLYNPEKAKKQMDKAKKALEAQGVQFPIHLDMPQDQTASGLMQQAQSMKQSIEKSLGKENVVIDIIELNTDTY
NNITYMAETTNQQDWDLSTASGWSPDHADPSSYLDIFNPTMASAQTKFIGLNPIKDVAIANEAGLEEFTRLDGDAGHITD
NQDERFKKYAQAQAALTDSAVYIPTYSLGGTPSITKVVPFTGAFGWSGNKSDASTFYKYMKLQDKPVTSKDYNKALKKWK
KDKEKSNEKYAESLEKHIEK

Nucleotide


Download         Length: 1983 bp        

>NTDB_id=1128469 FQT45_RS02210 WP_077322871.1 415777..417759(+) (amiA3) [Streptococcus pseudoporcinus strain NCTC10228]
ATGAAAAATGGCAAGTGGTTGGCCGCTATTGGGATAGCGATTTTATCAGTCTCTACCTTAGCAGCTTGTAGCAATGGATC
AAGCAAAGACAGTAAGTCAAAAAACTATAGTTATGTCTATGCAACAGATCCAGATACTTTAGATTATTTGGTTTCAGGTC
GTTCAACAACAAGTGAAATCATTCAAAATAGTGTCGATGGCTTAATGGAATATGATAACATGGGGAATTTGGTTCCCTCA
GTTGCTAAAAGCTGGACAGTATCTAAAGATGGCTTAACATACACCTATAAAATTCGTAAGGATTCAAAATGGTACACTGC
TGATGGTGAAGAGTATGCAAACGTTACAGCAAATGATTTTGTGGCTGGTTTGAAACATGCTGCTGACAAGGGTTCAGATG
CTCTTTACCTTGTACAAGATTCTATAAAAGGTTTGGGAGATTACGTTGAAGGAAAAACCAAAGACTTCTCGACTGTAGGC
GTGAAAGCTATTGACAAAAATACCCTTCAATACACGCTTAATAAACCTGAAAGCTTCTGGAATTCAAAATTAACATATGG
GATTCTATCTCCTGTTAATGCTGACTTCTTAAAATCTAAAGGTAAGGATTTTGGTAAAGCATCAGATCCATCTTCTATCC
TATATAATGGGCCATTCTTGATTTCATCATTGACAAGCAAGTCATCTATTGAATTTGTCAAAAATGAAAATTATTGGGAT
AAAAAAGATGTGCATGTTGATGGTGTACAGTTAACCTATTATGATGGTCAAGATCAAGAATCACTATTTAGAAATTTTGA
TAAAGGTGCCTATTCTGCAGCACGTCTTTTCCCGACAACACCTTCTTATAAAAAAGTTAAGAAAAACTATGGCGACAATA
TTATCTATGCGCCACAAAAATCAAATACCTATTATGCTACATTTAATTTGAATCGCACAGCTTATGACCATACTAAAAAA
ACAAGTGATAAACAAAAAGATGATACCCGTAAGGCTGTTTTAAATAAAGATTTCCGTCAGGCATTAACATTTGGATTTAA
TAGAAAATCATATACTGCTCAGACTGCTGGTGAAGATGGAGCAGGTAAATCTCTTCGGAATACTCTAGTTCCACCTGCAT
TTGTTCAAATTGATGGTCACGATTTTGGCAAAACGGTTGAAAAAGAGCTAGCTAATTATGGGGAACAGTGGAAAGATGTT
AATCTTGCTGATGCGCAAGATGGCCTCTATAATCCAGAGAAAGCTAAAAAGCAAATGGACAAAGCTAAAAAAGCTTTGGA
AGCTCAAGGAGTACAATTCCCAATCCACCTTGATATGCCACAAGATCAAACTGCATCTGGCTTAATGCAACAAGCTCAAT
CAATGAAACAATCTATTGAAAAGTCTCTTGGGAAAGAAAACGTTGTGATTGATATTATTGAGCTCAATACTGATACATAT
AACAATATCACTTACATGGCTGAAACAACAAATCAACAAGACTGGGATCTCTCAACTGCCTCAGGTTGGAGCCCAGACCA
TGCAGATCCGTCTTCTTATCTTGATATATTCAACCCAACAATGGCAAGTGCTCAAACAAAATTCATTGGCCTTAATCCAA
TCAAAGACGTGGCTATTGCTAATGAGGCAGGTCTAGAAGAATTTACAAGACTAGATGGTGACGCAGGTCACATTACGGAT
AATCAGGATGAACGATTTAAAAAATACGCCCAAGCCCAAGCTGCTTTAACAGATTCAGCCGTTTATATTCCAACTTACTC
ACTAGGTGGAACCCCTTCAATCACTAAAGTGGTACCATTTACAGGAGCATTTGGCTGGTCTGGTAACAAATCTGATGCAT
CTACATTTTATAAATATATGAAACTTCAAGATAAACCCGTAACATCAAAAGATTATAATAAAGCTTTGAAAAAATGGAAA
AAAGATAAAGAAAAATCTAATGAAAAATATGCTGAGTCGCTAGAAAAGCATATTGAAAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(77-518)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4U9XJL2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA3 Streptococcus thermophilus LMG 18311

53.939

100

0.539
  amiA3 Streptococcus thermophilus LMD-9

53.788

100

0.538
  amiA Streptococcus salivarius strain HSISS4

53.788

100

0.538

Multiple sequence alignment