Detailed information NTG1128473

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: FQT45_RS02230
• Genome accession: NZ_LR595858
• Coordinates: 421326..422249 (+)
• Length: 307 a.a.
• NCBI ID: WP_077322869.1
• Uniprot ID: -
• Organism: Streptococcus pseudoporcinus strain NCTC10228
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 416326..427249

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FQT45_RS02215 (NCTC10228_00448)	amiC	417829..419328 (+)	1500	WP_007893616.1	ABC transporter permease	Regulator
FQT45_RS02220 (NCTC10228_00449)	amiD	419328..420254 (+)	927	WP_007893576.1	oligopeptide ABC transporter permease OppC	Regulator
FQT45_RS02225 (NCTC10228_00450)	amiE	420263..421333 (+)	1071	WP_077322870.1	ABC transporter ATP-binding protein	Regulator
FQT45_RS02230 (NCTC10228_00451)	amiF	421326..422249 (+)	924	WP_077322869.1	ABC transporter ATP-binding protein	Regulator

Sequence

Protein

• Length: 307 a.a.
• Molecular weight: 34553.92 Da
• Isoelectric Point: 6.8600

>NTDB_id=1128473 FQT45_RS02230 WP_077322869.1 421326..422249(+) (amiF) [Streptococcus pseudoporcinus strain NCTC10228]
MSEKLVEVKDLEISFGEGKKKFVAVKNANFFINKGETFSLVGESGSGKTTIGRAIIGLNETSKGDILYDGKVINGKKSKS
EANALIRKIQMIFQDPAASLNERATVDYIISEGLYNFNLFKTEEERQEKIKNMMSEVGLLSEHLTRYPHEFSGGQRQRIG
IARALVMDPEFVIADEPISALDVSVRAQVLNLLKKMQKEKGLTYLFIAHDLSVVRFISDRIAVIHKGVIVEVAETEELFI
NPIHPYTKSLLSAVPIPDPILERKKKLIVYSADQHDYSVDKPEMVEIKPGHFVWANKVEVAEYQKEL

Nucleotide

• Length: 924 bp

>NTDB_id=1128473 FQT45_RS02230 WP_077322869.1 421326..422249(+) (amiF) [Streptococcus pseudoporcinus strain NCTC10228]
ATGTCTGAGAAATTAGTTGAAGTCAAAGACTTAGAAATTTCCTTCGGTGAAGGAAAGAAAAAATTTGTAGCCGTCAAAAA
TGCTAACTTCTTTATTAACAAAGGAGAGACTTTTTCACTTGTTGGAGAATCAGGATCTGGTAAGACCACAATTGGACGTG
CTATCATTGGTTTGAATGAGACAAGTAAAGGTGATATTCTTTATGACGGAAAAGTCATAAATGGAAAAAAATCAAAATCT
GAAGCCAACGCATTAATTCGTAAGATTCAGATGATTTTCCAAGATCCAGCTGCTAGTTTAAATGAGCGAGCAACAGTTGA
TTATATCATTTCAGAAGGTCTTTATAACTTTAACCTCTTTAAAACTGAAGAAGAACGCCAAGAAAAGATAAAAAATATGA
TGTCAGAAGTCGGTCTGCTATCAGAACATCTGACGCGGTATCCCCATGAATTTTCTGGTGGGCAACGCCAGCGTATTGGG
ATCGCACGTGCCTTAGTTATGGACCCTGAGTTTGTCATTGCAGATGAACCTATATCGGCTCTTGATGTCTCTGTTCGGGC
TCAAGTCTTAAACCTTTTGAAAAAGATGCAAAAAGAAAAAGGACTAACCTATCTCTTTATTGCTCATGACTTATCCGTTG
TACGTTTTATATCTGATCGAATAGCAGTTATTCATAAAGGGGTCATTGTGGAAGTTGCTGAAACAGAAGAACTCTTCATT
AATCCGATTCACCCTTATACCAAGTCTCTTTTATCAGCGGTACCAATCCCTGATCCGATATTGGAGAGAAAGAAAAAATT
AATTGTCTACTCAGCTGACCAGCACGACTATTCAGTTGACAAACCTGAGATGGTTGAGATAAAACCAGGACATTTTGTAT
GGGCTAATAAAGTTGAAGTTGCGGAATATCAAAAAGAACTATAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (230-262)

• ABC transporter (ABC_tran) (25-178)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMG 18311	83.66	99.674	0.834
amiF	Streptococcus thermophilus LMD-9	83.333	99.674	0.831
amiF	Streptococcus salivarius strain HSISS4	83.007	99.674	0.827