Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiC   Type   Regulator
Locus tag   FQT45_RS02215 Genome accession   NZ_LR595858
Coordinates   417829..419328 (+) Length   499 a.a.
NCBI ID   WP_007893616.1    Uniprot ID   A0A4U9XI74
Organism   Streptococcus pseudoporcinus strain NCTC10228     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 412829..424328
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FQT45_RS02200 (NCTC10228_00445) pbp3 412953..414167 (-) 1215 WP_077322873.1 D-alanyl-D-alanine carboxypeptidase PBP3 -
  FQT45_RS02205 (NCTC10228_00446) pbp3 414214..415452 (-) 1239 WP_077322872.1 D-alanyl-D-alanine carboxypeptidase PBP3 -
  FQT45_RS02210 (NCTC10228_00447) amiA3 415777..417759 (+) 1983 WP_077322871.1 peptide ABC transporter substrate-binding protein Regulator
  FQT45_RS02215 (NCTC10228_00448) amiC 417829..419328 (+) 1500 WP_007893616.1 ABC transporter permease Regulator
  FQT45_RS02220 (NCTC10228_00449) amiD 419328..420254 (+) 927 WP_007893576.1 oligopeptide ABC transporter permease OppC Regulator
  FQT45_RS02225 (NCTC10228_00450) amiE 420263..421333 (+) 1071 WP_077322870.1 ABC transporter ATP-binding protein Regulator
  FQT45_RS02230 (NCTC10228_00451) amiF 421326..422249 (+) 924 WP_077322869.1 ABC transporter ATP-binding protein Regulator

Sequence

Protein


Download         Length: 499 a.a.        Molecular weight: 56042.76 Da        Isoelectric Point: 10.1407

>NTDB_id=1128470 FQT45_RS02215 WP_007893616.1 417829..419328(+) (amiC) [Streptococcus pseudoporcinus strain NCTC10228]
MKKYIIERILRSLISILLVTTLTYVIVFTLVPTNLIFKQDPNYNKMVTTPDKKENYRNTIFERMGYISYYNSKELEAKAE
KIDKSVSVEPSKANQKIYQAYIKSIGNGWKLKRFEESKKFYAVRNIPIYERVWNFFSHLIVIDHPWVIKDKSNPNLARYI
RPEIDPAVGPALVGSGTKHKYMLYFNKQFPFVHQNFIGFNLGISYPTYANIPVIQVITQEQGRTLSKEVTFPNGTKKFSP
INIYSRTYKSPSKADVRDRMNFGKDDPYTATENNHAEPSMISNSFIIGMIGVLLSYIFGLPIGMLMAYYKDGIFDRFSTG
ATTFMLALPSIALIYIVRFIGSMVGLPDTFPLLGASDPKSYVLPALILGILGTPGNVVWFRRYLVDLQGSDFVRFARAKG
LTEAEISKNHLFKQAMVPIVNGIPQAVVATIAGATLTETVFAFPGMGKMLIDAIKVANNAMVVGLVFIFAVLSILALLAG
DILMTILDPRIKLSSKGGK

Nucleotide


Download         Length: 1500 bp        

>NTDB_id=1128470 FQT45_RS02215 WP_007893616.1 417829..419328(+) (amiC) [Streptococcus pseudoporcinus strain NCTC10228]
ATGAAAAAGTATATTATTGAGCGCATCTTGAGGTCCTTAATATCAATTTTGTTGGTAACTACACTGACTTATGTCATCGT
TTTTACACTTGTTCCAACAAATTTGATTTTTAAACAAGATCCTAATTATAACAAGATGGTGACGACACCAGATAAAAAAG
AAAATTATCGAAATACAATTTTCGAGCGTATGGGCTATATTTCTTACTACAATAGTAAAGAATTAGAAGCTAAGGCTGAG
AAAATAGATAAATCTGTTAGCGTTGAACCATCAAAGGCTAATCAAAAAATCTATCAGGCCTATATCAAATCCATCGGAAA
TGGTTGGAAATTGAAACGTTTTGAAGAAAGTAAAAAATTCTATGCAGTCCGTAACATACCAATTTATGAGCGAGTGTGGA
ATTTTTTCAGTCACTTGATAGTAATTGATCACCCGTGGGTAATTAAAGATAAATCAAATCCGAACCTAGCTCGCTATATT
CGCCCAGAAATAGATCCAGCAGTAGGCCCAGCTTTGGTTGGTTCAGGGACTAAACATAAGTATATGTTATACTTCAATAA
ACAATTTCCCTTTGTTCACCAAAACTTTATTGGCTTTAATTTGGGGATTTCCTATCCAACTTACGCTAATATTCCTGTTA
TTCAAGTTATTACACAAGAACAAGGGCGCACGTTATCTAAAGAAGTAACCTTCCCAAATGGGACTAAGAAGTTTTCACCA
ATTAATATCTACTCTCGCACTTACAAGTCACCTAGTAAGGCAGATGTTAGGGATCGAATGAACTTTGGAAAAGATGACCC
ATACACTGCAACTGAAAACAACCATGCAGAGCCATCTATGATAAGTAATTCATTCATTATTGGTATGATTGGTGTTTTAC
TATCGTATATCTTTGGCCTTCCGATTGGTATGTTGATGGCTTATTATAAAGACGGCATATTTGATCGTTTCTCTACTGGT
GCCACAACATTTATGTTAGCCCTTCCTAGCATTGCCTTGATATATATTGTTCGTTTCATAGGCTCAATGGTTGGCCTTCC
TGATACGTTTCCATTGTTAGGTGCAAGCGATCCTAAGTCTTATGTCTTGCCAGCTCTAATTTTGGGAATTCTAGGAACAC
CAGGAAATGTCGTCTGGTTCCGTCGCTACTTGGTAGACTTACAAGGTAGTGATTTTGTTCGATTTGCGCGTGCTAAAGGA
TTAACGGAAGCTGAAATATCAAAAAATCACTTATTTAAACAAGCTATGGTTCCCATTGTCAATGGAATTCCACAGGCAGT
AGTTGCAACTATCGCAGGAGCTACCTTAACTGAAACTGTTTTTGCTTTTCCAGGAATGGGTAAAATGCTGATTGATGCTA
TTAAAGTAGCTAATAATGCAATGGTTGTTGGCCTTGTCTTTATCTTCGCAGTTCTTTCCATTTTAGCATTGCTAGCTGGT
GACATTCTAATGACCATACTTGATCCGCGTATCAAATTATCTAGTAAAGGAGGAAAGTAA

Domains

Predicted by InterproScan.

Binding-protein-dependent transport system inner membrane component (BPD_transp_1)

(299-492)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4U9XI74

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiC Streptococcus salivarius strain HSISS4

62.525

100

0.625
  amiC Streptococcus thermophilus LMG 18311

62.325

100

0.623
  amiC Streptococcus thermophilus LMD-9

61.924

100

0.619

Multiple sequence alignment