Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA   Type   Regulator
Locus tag   FQT67_RS01820 Genome accession   NZ_LR595857
Coordinates   333171..335141 (+) Length   656 a.a.
NCBI ID   WP_046177392.1    Uniprot ID   A0A9X9R1P1
Organism   Streptococcus sp. NCTC 11567 strain NCTC11567     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 328171..340141
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FQT67_RS01800 (NCTC11567_00369) sufU 328214..328690 (+) 477 WP_046177396.1 Fe-S cluster assembly sulfur transfer protein SufU -
  FQT67_RS01805 (NCTC11567_00370) sufB 328683..330101 (+) 1419 WP_046177395.1 Fe-S cluster assembly protein SufB -
  FQT67_RS01810 (NCTC11567_00371) - 330277..331458 (-) 1182 WP_046177394.1 serine hydrolase -
  FQT67_RS01815 (NCTC11567_00372) pbp3 331602..332840 (-) 1239 WP_046177393.1 D-alanyl-D-alanine carboxypeptidase PBP3 -
  FQT67_RS01820 (NCTC11567_00373) amiA 333171..335141 (+) 1971 WP_046177392.1 peptide ABC transporter substrate-binding protein Regulator
  FQT67_RS01825 (NCTC11567_00374) amiC 335207..336709 (+) 1503 WP_003057826.1 ABC transporter permease Regulator
  FQT67_RS01830 (NCTC11567_00375) amiD 336709..337635 (+) 927 WP_003049687.1 oligopeptide ABC transporter permease OppC Regulator
  FQT67_RS01835 (NCTC11567_00376) amiE 337644..338714 (+) 1071 WP_003060269.1 ABC transporter ATP-binding protein Regulator
  FQT67_RS01840 (NCTC11567_00377) amiF 338707..339630 (+) 924 WP_003057816.1 ABC transporter ATP-binding protein Regulator

Sequence

Protein


Download         Length: 656 a.a.        Molecular weight: 72068.44 Da        Isoelectric Point: 4.9908

>NTDB_id=1128411 FQT67_RS01820 WP_046177392.1 333171..335141(+) (amiA) [Streptococcus sp. NCTC 11567 strain NCTC11567]
MKKSRWLATLGVAVLSVSVLAACGGKNASGGSDATKAYKYVFVNDPKSLDYILTNGGGTTDVITQMVDGLLENDEYGNLV
PSLAKDWKVSKDGLTYTYTLRDGVSWYTADGEEYAPVTAEDFVTGLKHAVDDKSDALYVVEDSIRNLKAYQNGEVDFKEV
GVKALDDKTVQYTLNKPESYWNSKTTYSVLFPVNAKFLKSKGKDFGTTDPSSILVNGAYFLSAFTSKSSMEFHKNENYWD
AKNVGIESVKLTYSDGSDPGSFYKNFDKGEFSVARLYPNDPTYKSAKKNYADNITYGMLTGDIRHLTWNLNRTSFKNTKK
DPAQQDAGKKALNNKDFRQAIQFAFDRASFQAQTVGQDAKTKALRNMLVPPTFVTIGENDFGSEVEKDLATMGDEWKDVN
LKDAQDGFYNPEKAKAEFAKAKEALTAEGVTFPVQLDYPVDQANAATVQEAQSFKQSVEASLGKENVIVNVLETETSTHE
AQGFYAETPEQQDYDIISSWWGPDYQDPRTYLDIMSPVGGGSVIQKLGIKAGQNQDVVAAAGLDTYQTLLDEAAAITDDN
DARYKAYAKAQAYLTDSAVDIPVVALGGTPRVSKAIPFSGGFSWAGAKGPLAYKGMKLQDKPVTAKQYEKAKEKWLKAKA
KSNAEYAEKLADHVEK

Nucleotide


Download         Length: 1971 bp        

>NTDB_id=1128411 FQT67_RS01820 WP_046177392.1 333171..335141(+) (amiA) [Streptococcus sp. NCTC 11567 strain NCTC11567]
ATGAAGAAAAGTAGATGGTTAGCAACTCTAGGTGTTGCGGTATTATCAGTATCCGTTTTAGCAGCTTGTGGTGGCAAAAA
TGCCTCAGGCGGTTCAGATGCAACTAAAGCTTACAAGTATGTGTTTGTTAACGATCCAAAATCGTTGGATTACATTTTAA
CAAATGGTGGCGGAACGACTGATGTGATAACACAAATGGTTGATGGTCTTTTGGAAAACGATGAGTATGGTAATTTAGTA
CCATCACTTGCTAAAGATTGGAAGGTTTCAAAAGACGGTCTGACATATACTTATACTCTTCGCGATGGTGTCTCTTGGTA
CACGGCTGATGGTGAAGAATACGCACCTGTAACAGCAGAAGATTTTGTGACTGGTTTGAAGCACGCGGTTGACGATAAAT
CAGATGCTCTTTACGTTGTTGAAGATTCAATAAGAAACTTAAAGGCTTACCAAAATGGTGAAGTAGATTTTAAAGAAGTT
GGTGTCAAAGCCCTTGACGATAAAACTGTTCAGTATACTTTAAACAAGCCTGAAAGCTACTGGAATTCAAAAACAACTTA
TAGTGTGCTTTTCCCAGTTAATGCGAAATTTTTGAAGTCAAAAGGTAAAGATTTTGGTACAACCGATCCATCATCAATCC
TTGTTAATGGTGCTTACTTCTTGAGCGCCTTCACCTCAAAATCATCTATGGAATTCCATAAAAATGAAAACTACTGGGAT
GCTAAGAATGTTGGGATAGAATCTGTTAAATTGACTTACTCAGATGGTTCAGACCCAGGTTCTTTCTACAAGAACTTTGA
CAAGGGTGAGTTCAGCGTTGCACGACTTTACCCAAATGACCCTACCTACAAATCAGCTAAGAAAAACTATGCTGATAACA
TTACTTACGGAATGTTGACTGGTGATATCCGTCATTTAACATGGAATTTGAACCGTACTTCTTTCAAAAATACTAAGAAA
GACCCTGCACAACAAGATGCCGGTAAGAAAGCTCTTAACAACAAGGACTTCCGTCAAGCTATCCAGTTTGCTTTTGACCG
TGCATCATTCCAAGCACAAACTGTAGGTCAGGATGCCAAAACAAAAGCCTTACGTAACATGCTTGTGCCACCAACTTTTG
TGACCATCGGAGAAAATGACTTTGGTTCAGAAGTTGAAAAAGACCTTGCTACCATGGGTGATGAATGGAAAGATGTTAAT
TTAAAAGATGCTCAAGATGGATTTTATAATCCTGAAAAAGCAAAAGCTGAGTTTGCAAAAGCCAAAGAAGCTTTGACAGC
TGAAGGTGTAACCTTCCCAGTTCAATTAGATTATCCTGTTGACCAAGCCAACGCAGCAACTGTTCAAGAGGCTCAATCCT
TTAAACAATCTGTTGAAGCATCACTTGGTAAAGAAAATGTCATTGTCAATGTTCTTGAAACAGAAACATCAACTCACGAA
GCCCAAGGCTTCTATGCTGAGACCCCAGAACAACAAGACTACGATATCATTTCATCATGGTGGGGACCAGACTACCAAGA
CCCACGTACCTACCTTGACATCATGAGTCCAGTAGGTGGTGGATCTGTTATCCAAAAACTTGGAATCAAAGCAGGTCAAA
ATCAGGATGTTGTGGCAGCTGCAGGCCTTGATACCTACCAAACTCTTCTTGATGAAGCAGCAGCAATTACAGACGATAAC
GATGCTCGTTACAAAGCTTATGCAAAAGCACAAGCCTACCTTACTGATAGTGCTGTAGATATTCCGGTTGTGGCCTTGGG
TGGTACTCCTCGTGTTTCTAAAGCTATTCCATTTAGCGGCGGCTTCTCTTGGGCAGGTGCTAAAGGACCTCTAGCATATA
AAGGAATGAAACTTCAAGACAAACCTGTCACAGCAAAACAATACGAAAAAGCAAAAGAAAAATGGTTGAAAGCAAAGGCT
AAATCAAACGCAGAATATGCTGAGAAATTAGCTGATCACGTTGAAAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(79-515)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA Streptococcus salivarius strain HSISS4

50.832

100

0.512
  amiA3 Streptococcus thermophilus LMG 18311

49.849

100

0.503
  amiA3 Streptococcus thermophilus LMD-9

49.547

100

0.5

Multiple sequence alignment