Detailed information NTG1128415

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: FQT67_RS01840
• Genome accession: NZ_LR595857
• Coordinates: 338707..339630 (+)
• Length: 307 a.a.
• NCBI ID: WP_003057816.1
• Uniprot ID: A0A9X8T611
• Organism: Streptococcus sp. NCTC 11567 strain NCTC11567
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 333707..344630

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FQT67_RS01825 (NCTC11567_00374)	amiC	335207..336709 (+)	1503	WP_003057826.1	ABC transporter permease	Regulator
FQT67_RS01830 (NCTC11567_00375)	amiD	336709..337635 (+)	927	WP_003049687.1	oligopeptide ABC transporter permease OppC	Regulator
FQT67_RS01835 (NCTC11567_00376)	amiE	337644..338714 (+)	1071	WP_003060269.1	ABC transporter ATP-binding protein	Regulator
FQT67_RS01840 (NCTC11567_00377)	amiF	338707..339630 (+)	924	WP_003057816.1	ABC transporter ATP-binding protein	Regulator

Sequence

Protein

• Length: 307 a.a.
• Molecular weight: 34796.93 Da
• Isoelectric Point: 6.4058

>NTDB_id=1128415 FQT67_RS01840 WP_003057816.1 338707..339630(+) (amiF) [Streptococcus sp. NCTC 11567 strain NCTC11567]
MSEKLVEVKDLEISFGEGKKKFVAVKNANFFIKKGETFSLVGESGSGKTTIGRAIIGLNDTSSGDILYDGKVINRRKSKS
ESNELIRKIQMIFQDPAASLNERATVDYIISEGLYNFNLFKTEEERKEKIKNMMAEVGLLSEHLTRYPHEFSGGQRQRIG
IARALVMNPEFVIADEPISALDVSVRAQVLNLLKRMQAEKGLTYLFIAHDLSVVRFISDRIAVIHKGVIVEVAETEELFN
NPIHPYTKSLLSAVPIPDPILERQKELIVYNPEQHDYTEDKPTMVEIKPNHFVWANQAEVEKYKAEQ

Nucleotide

• Length: 924 bp

>NTDB_id=1128415 FQT67_RS01840 WP_003057816.1 338707..339630(+) (amiF) [Streptococcus sp. NCTC 11567 strain NCTC11567]
ATGTCTGAGAAATTAGTCGAAGTTAAAGACCTAGAAATTTCCTTCGGAGAGGGAAAGAAAAAATTTGTTGCGGTTAAAAA
TGCCAATTTCTTTATCAAAAAAGGTGAAACTTTCTCTTTAGTTGGAGAATCTGGAAGTGGTAAAACAACAATTGGTCGTG
CTATTATTGGTTTGAATGATACCAGTTCTGGCGACATCCTTTATGATGGAAAAGTTATCAATCGAAGAAAGTCAAAATCA
GAATCAAATGAGCTCATTCGTAAGATTCAAATGATTTTCCAAGATCCTGCAGCTAGTCTGAATGAACGTGCAACTGTTGA
CTATATCATTTCAGAAGGTCTTTATAATTTTAATCTGTTCAAAACAGAAGAAGAGCGTAAGGAAAAGATTAAGAACATGA
TGGCCGAAGTTGGTTTGTTATCAGAACATTTGACTCGCTATCCTCACGAATTTTCAGGGGGCCAACGCCAGCGGATCGGT
ATCGCTAGAGCCCTAGTGATGAATCCCGAATTTGTCATTGCTGACGAACCTATCTCCGCTCTAGACGTTTCTGTTCGAGC
ACAGGTCTTGAATCTTCTTAAAAGAATGCAAGCCGAAAAAGGACTTACATATCTTTTCATCGCCCACGACCTATCAGTTG
TTCGTTTTATTTCAGATCGTATTGCGGTTATCCATAAAGGTGTTATTGTGGAGGTTGCTGAAACAGAAGAACTGTTCAAT
AATCCTATCCACCCGTATACAAAATCTCTTTTATCAGCTGTTCCGATTCCAGATCCAATATTGGAACGTCAAAAAGAGCT
TATTGTCTATAACCCAGAGCAACATGACTATACAGAAGATAAACCAACGATGGTTGAAATTAAGCCAAATCACTTTGTGT
GGGCTAATCAAGCAGAAGTTGAAAAGTATAAAGCAGAACAATAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (230-262)

• ABC transporter (ABC_tran) (25-178)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMG 18311	81.759	100	0.818
amiF	Streptococcus thermophilus LMD-9	81.433	100	0.814
amiF	Streptococcus salivarius strain HSISS4	81.433	100	0.814