Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiE   Type   Regulator
Locus tag   FQT67_RS01835 Genome accession   NZ_LR595857
Coordinates   337644..338714 (+) Length   356 a.a.
NCBI ID   WP_003060269.1    Uniprot ID   A0A9X9SP86
Organism   Streptococcus sp. NCTC 11567 strain NCTC11567     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 332644..343714
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FQT67_RS01820 (NCTC11567_00373) amiA 333171..335141 (+) 1971 WP_046177392.1 peptide ABC transporter substrate-binding protein Regulator
  FQT67_RS01825 (NCTC11567_00374) amiC 335207..336709 (+) 1503 WP_003057826.1 ABC transporter permease Regulator
  FQT67_RS01830 (NCTC11567_00375) amiD 336709..337635 (+) 927 WP_003049687.1 oligopeptide ABC transporter permease OppC Regulator
  FQT67_RS01835 (NCTC11567_00376) amiE 337644..338714 (+) 1071 WP_003060269.1 ABC transporter ATP-binding protein Regulator
  FQT67_RS01840 (NCTC11567_00377) amiF 338707..339630 (+) 924 WP_003057816.1 ABC transporter ATP-binding protein Regulator

Sequence

Protein


Download         Length: 356 a.a.        Molecular weight: 39593.59 Da        Isoelectric Point: 5.6648

>NTDB_id=1128414 FQT67_RS01835 WP_003060269.1 337644..338714(+) (amiE) [Streptococcus sp. NCTC 11567 strain NCTC11567]
MTKENNVILTAKDVVVEFDVRDRVLTAIRNVSLELVEGEVLAFVGESGSGKSVLTKTFTGMLESNGRIANGSIVYRGQEL
TELKTNKEWAKIRGSKIATIFQDPMTSLSPIKTIGSQITEVIIKHQKVSHSKAKELALDYMNKVGIPNATKRFDDYPFEY
SGGMRQRIVIAIALACRPDILICDEPTTALDVTIQAQIIELLKSLQKEYHFTIIFITHDLGVVASIADKVAVMYAGEIVE
FGTVEEIFYDPRHPYTWSLLSSLPQLANESGELYSIPGTPPSLYSPIVGDAFALRSEYAMVLDFEETPPAISVSDTHWAK
TWLLHPEAPKVQKPAVIQDLHQKILKKMSRQEEGNV

Nucleotide


Download         Length: 1071 bp        

>NTDB_id=1128414 FQT67_RS01835 WP_003060269.1 337644..338714(+) (amiE) [Streptococcus sp. NCTC 11567 strain NCTC11567]
ATGACAAAAGAAAATAATGTAATCTTAACTGCCAAAGATGTGGTGGTGGAATTCGACGTGCGCGACCGTGTTTTAACGGC
TATTCGGAACGTTTCTTTAGAGCTTGTTGAAGGAGAGGTCCTTGCTTTTGTAGGAGAATCAGGTTCAGGTAAATCTGTTT
TAACCAAGACCTTTACAGGGATGTTGGAGTCTAATGGACGTATTGCCAACGGCTCGATTGTCTACCGTGGTCAAGAATTA
ACAGAACTAAAAACGAATAAGGAATGGGCTAAGATTCGTGGTTCAAAAATTGCTACTATTTTCCAAGATCCAATGACCAG
TCTTAGTCCTATCAAAACCATTGGTAGCCAGATTACAGAGGTCATTATCAAGCATCAAAAAGTTAGCCATTCTAAAGCCA
AAGAATTGGCGCTTGATTATATGAATAAAGTTGGTATTCCAAATGCGACAAAGCGTTTTGATGACTATCCATTTGAATAT
TCAGGTGGTATGCGCCAACGTATTGTTATTGCCATTGCGTTAGCTTGCCGCCCAGATATCCTGATTTGTGATGAGCCCAC
AACAGCTCTCGACGTTACAATACAAGCCCAAATTATTGAATTGTTGAAATCACTTCAAAAAGAGTACCATTTTACGATTA
TTTTTATCACTCATGATTTAGGTGTTGTGGCAAGTATTGCTGACAAGGTTGCTGTCATGTATGCTGGTGAAATTGTCGAG
TTTGGAACTGTTGAAGAAATTTTCTATGATCCACGTCATCCTTACACATGGAGTTTATTGTCAAGCTTACCGCAATTAGC
CAATGAGTCAGGAGAACTTTACTCAATTCCAGGGACACCACCGTCACTTTATTCGCCAATCGTTGGAGATGCATTTGCGC
TTCGCTCAGAATATGCTATGGTTTTGGATTTCGAAGAGACACCACCTGCTATTAGTGTGTCTGATACTCATTGGGCAAAA
ACATGGCTTTTGCACCCAGAGGCGCCAAAAGTTCAGAAACCGGCAGTTATTCAAGATTTACATCAAAAAATCTTGAAAAA
AATGTCACGACAGGAGGAAGGAAATGTCTGA

Domains

Predicted by InterproScan.

Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY)

(239-299)

ABC transporter (ABC_tran)

(29-187)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

77.778

100

0.787
  amiE Streptococcus thermophilus LMG 18311

76.667

100

0.775
  amiE Streptococcus thermophilus LMD-9

76.667

100

0.775
  oppD Streptococcus mutans UA159

57.27

94.663

0.542

Multiple sequence alignment