Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA3   Type   Regulator
Locus tag   FGL17_RS02210 Genome accession   NZ_LR594052
Coordinates   417126..419108 (+) Length   660 a.a.
NCBI ID   WP_093959229.1    Uniprot ID   A0A4V0H296
Organism   Streptococcus porcinus strain NCTC10924     
Function   binding to XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 412126..424108
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL17_RS02195 (NCTC10924_00441) - 413025..414185 (-) 1161 WP_370737020.1 D-alanyl-D-alanine carboxypeptidase family protein -
  FGL17_RS02200 (NCTC10924_00442) pbp3 414301..415581 (-) 1281 WP_232036525.1 D-alanyl-D-alanine carboxypeptidase PBP3 -
  FGL17_RS02205 (NCTC10924_00443) pbp3 415562..416800 (-) 1239 WP_093959228.1 D-alanyl-D-alanine carboxypeptidase PBP3 -
  FGL17_RS02210 (NCTC10924_00444) amiA3 417126..419108 (+) 1983 WP_093959229.1 peptide ABC transporter substrate-binding protein Regulator
  FGL17_RS02215 (NCTC10924_00445) amiC 419178..420677 (+) 1500 WP_093959230.1 ABC transporter permease Regulator
  FGL17_RS02220 (NCTC10924_00446) amiD 420677..421603 (+) 927 WP_093959231.1 oligopeptide ABC transporter permease OppC Regulator
  FGL17_RS02225 (NCTC10924_00447) - 421612..422447 (+) 836 Protein_383 ABC transporter ATP-binding protein -
  FGL17_RS02230 (NCTC10924_00448) amiF 422440..423363 (+) 924 WP_003084166.1 ABC transporter ATP-binding protein Regulator

Sequence

Protein


Download         Length: 660 a.a.        Molecular weight: 73416.90 Da        Isoelectric Point: 6.1459

>NTDB_id=1128120 FGL17_RS02210 WP_093959229.1 417126..419108(+) (amiA3) [Streptococcus porcinus strain NCTC10924]
MKNGKWLAAVGVAILSVSVLAACSNGSSKDSKSKTYSYVYTTDPDTLDYLISGRSTTSDIIQNSIDGLMEYDNMGNLVPS
VAKSWTVSKDGLTYTYKIRKDSKWYTADGEEYANVTADDFVTGLKHAADKGSDALYLVQDSIKGLSDYVEGKTKDFSTVG
VKAVDKNTLQYTLNKPESFWNSKLTYGILSPVNADFLKSKGKDFGKASDSSSILYNGPFLISSLTSKSSIEFVKNENYWD
KEDVHVDGVQLTYYDGQDQESLFRNFDKGAYSAARLFPTTPSYSKVKKNYGDNIIYAPQKSNTYYATFNLNRTAYEHTKK
TSDKQKEDTRKAVLNKDFRQALTFGFNRKSYTAQTAGEEAAGKSLRNTLVPPAFVQIDGQDFGKTVEKELATYGDQWKDV
NLADAQDGLYNPEKAKMQMDKAKKALEAQGVQFPIHLDMPQDQTASGLMQQAQSMKQSIEKSLGKENVVVDIIELNSDTY
NNITYMAETTNQQDWDLSTASGWSPDYADPSSYLDIFNPTMAAAQTKFIGINPVKDVAIANEAGLEEFSNLDNEAGKIID
NQDERFKKYAKAQAALTDSAVYIPTYSLGGTPSVTKVVPFTGAFGWSGNKSDVSTFYKYIKLQDKPVTSKDYSQALKKWK
KDKEKSNKKYAESLEKHMEK

Nucleotide


Download         Length: 1983 bp        

>NTDB_id=1128120 FGL17_RS02210 WP_093959229.1 417126..419108(+) (amiA3) [Streptococcus porcinus strain NCTC10924]
ATGAAAAATGGCAAGTGGTTAGCTGCTGTTGGGGTGGCGATTTTATCAGTCTCTGTCCTAGCGGCTTGTAGCAATGGATC
AAGCAAAGACAGTAAGTCAAAAACTTACAGTTATGTTTATACAACAGATCCAGATACTTTGGATTATTTGATTTCAGGAC
GTTCAACAACAAGTGATATAATCCAAAATAGTATTGACGGCTTAATGGAATATGATAACATGGGAAATCTAGTTCCCTCA
GTTGCTAAAAGCTGGACAGTATCTAAAGACGGCTTAACATATACCTATAAAATTCGTAAGGATTCAAAATGGTACACTGC
TGATGGTGAAGAGTACGCAAATGTGACAGCAGATGATTTTGTAACTGGTTTGAAGCATGCTGCTGATAAGGGATCAGATG
CTCTTTATCTTGTACAAGATTCTATAAAAGGCCTGAGTGATTATGTCGAAGGAAAAACCAAGGACTTCTCAACTGTAGGC
GTAAAAGCTGTTGATAAAAATACCCTTCAATACACCCTTAATAAACCAGAAAGCTTTTGGAATTCAAAATTAACATATGG
AATCCTTTCACCTGTAAATGCTGACTTTTTAAAATCTAAAGGTAAGGATTTTGGTAAAGCATCAGATTCATCTTCCATCT
TATACAATGGACCATTCCTGATTTCATCTTTAACGAGCAAGTCATCTATTGAATTTGTCAAAAATGAAAATTATTGGGAT
AAAGAAGATGTCCATGTTGATGGTGTACAGTTAACTTACTATGATGGTCAAGATCAAGAGTCACTATTTAGGAATTTTGA
CAAAGGTGCTTATTCTGCAGCGCGTCTTTTCCCTACAACACCTTCTTACTCAAAAGTTAAGAAAAATTATGGTGACAACA
TCATTTACGCACCGCAAAAATCAAACACTTATTATGCTACATTCAATCTGAATCGTACAGCTTATGAGCATACTAAGAAA
ACAAGTGATAAACAAAAAGAGGATACTCGTAAGGCTGTCTTAAATAAAGATTTCCGTCAAGCCTTGACATTTGGTTTCAA
TAGAAAATCGTATACAGCTCAAACTGCAGGTGAAGAGGCGGCAGGTAAATCGCTTCGAAATACTTTAGTTCCGCCTGCAT
TTGTTCAAATTGATGGTCAAGATTTTGGAAAAACAGTAGAAAAAGAGCTAGCTACTTACGGAGATCAATGGAAAGATGTC
AATCTTGCTGATGCCCAAGATGGTCTCTATAATCCAGAGAAAGCTAAAATGCAAATGGATAAGGCCAAAAAAGCTTTAGA
AGCTCAAGGGGTACAATTCCCGATTCACCTTGACATGCCTCAAGACCAAACTGCATCCGGCTTAATGCAACAAGCTCAAT
CTATGAAACAATCTATTGAAAAATCACTAGGAAAAGAAAATGTCGTTGTTGATATTATTGAACTTAATTCAGACACATAT
AACAACATCACATATATGGCTGAAACAACCAATCAACAAGACTGGGATCTCTCAACTGCCTCAGGTTGGAGCCCAGACTA
TGCTGATCCTTCTTCTTACTTAGATATCTTCAATCCAACAATGGCGGCTGCTCAAACAAAATTCATTGGTATTAATCCAG
TAAAAGACGTGGCTATTGCTAATGAAGCTGGTTTGGAAGAGTTTTCAAACTTAGACAATGAAGCTGGTAAAATTATAGAT
AATCAGGATGAGCGATTTAAAAAATATGCCAAAGCGCAAGCTGCTTTAACAGATTCAGCAGTTTATATTCCAACCTACTC
ACTAGGTGGAACTCCCTCTGTTACTAAAGTGGTACCATTTACAGGAGCCTTTGGATGGTCTGGTAATAAATCTGATGTAA
GTACATTTTATAAATACATAAAACTTCAAGATAAACCTGTAACATCAAAAGACTATAGCCAAGCTTTGAAAAAATGGAAA
AAAGATAAAGAAAAATCTAATAAAAAATATGCTGAATCTCTAGAAAAGCATATGGAAAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(77-518)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4V0H296

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA3 Streptococcus thermophilus LMG 18311

53.788

100

0.538
  amiA3 Streptococcus thermophilus LMD-9

53.636

100

0.536
  amiA Streptococcus salivarius strain HSISS4

53.485

100

0.535

Multiple sequence alignment