Detailed information NTG1128123

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: FGL17_RS02230
• Genome accession: NZ_LR594052
• Coordinates: 422440..423363 (+)
• Length: 307 a.a.
• NCBI ID: WP_003084166.1
• Uniprot ID: -
• Organism: Streptococcus porcinus strain NCTC10924
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 417440..428363

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FGL17_RS02215 (NCTC10924_00445)	amiC	419178..420677 (+)	1500	WP_093959230.1	ABC transporter permease	Regulator
FGL17_RS02220 (NCTC10924_00446)	amiD	420677..421603 (+)	927	WP_093959231.1	oligopeptide ABC transporter permease OppC	Regulator
FGL17_RS02225 (NCTC10924_00447)	-	421612..422447 (+)	836	Protein_383	ABC transporter ATP-binding protein	-
FGL17_RS02230 (NCTC10924_00448)	amiF	422440..423363 (+)	924	WP_003084166.1	ABC transporter ATP-binding protein	Regulator

Sequence

Protein

• Length: 307 a.a.
• Molecular weight: 34638.98 Da
• Isoelectric Point: 6.8600

>NTDB_id=1128123 FGL17_RS02230 WP_003084166.1 422440..423363(+) (amiF) [Streptococcus porcinus strain NCTC10924]
MSEKLVEVKDLEISFGEGKKKFVAVQNANFFINKGETFSLVGESGSGKTTIGRAIIGLNDTSKGEILYDGKVINGKKSKS
EANELIRKIQMIFQDPAASLNERATVDYIISEGLYNFNLFKTEEERQEKIKNMMSEVGLLSEHLTRYPHEFSGGQRQRIG
IARALVMDPEFVIADEPISALDVSVRAQVLNLLKRMQKEKGLTYLFIAHDLSVVRFISDRIAVIHKGIIVEVAETEELFI
NPVHPYTKSLLSAVPIPDPILERKKKLIVYSVDQHDYSVDKPEMVEIKPGHFVWANKAEVAKYQKEL

Nucleotide

• Length: 924 bp

>NTDB_id=1128123 FGL17_RS02230 WP_003084166.1 422440..423363(+) (amiF) [Streptococcus porcinus strain NCTC10924]
ATGTCTGAGAAATTAGTTGAAGTCAAAGACTTAGAAATTTCCTTCGGTGAAGGAAAGAAAAAATTTGTAGCCGTTCAAAA
TGCTAACTTCTTCATTAACAAAGGAGAGACCTTCTCTCTCGTTGGAGAGTCGGGATCTGGCAAGACCACAATTGGACGTG
CTATCATTGGTTTGAATGATACAAGTAAAGGGGAAATTCTTTACGACGGAAAAGTGATAAATGGTAAAAAGTCAAAGTCT
GAAGCGAATGAATTAATCCGTAAAATTCAGATGATTTTCCAAGATCCAGCTGCCAGTTTAAATGAGCGGGCAACAGTTGA
TTATATCATTTCAGAAGGTCTTTATAATTTTAACCTCTTTAAAACTGAAGAAGAACGACAAGAAAAGATAAAAAATATGA
TGTCAGAGGTAGGTCTGTTATCAGAACATCTCACACGTTATCCCCATGAATTTTCTGGTGGACAACGCCAGAGGATTGGG
ATTGCACGTGCTTTGGTGATGGATCCAGAGTTTGTTATTGCAGATGAACCTATATCAGCCCTTGATGTCTCTGTTCGTGC
CCAAGTCCTAAACCTTTTAAAAAGAATGCAAAAAGAAAAAGGATTAACTTATCTCTTTATTGCGCATGATTTATCAGTTG
TACGTTTTATATCAGACCGAATAGCAGTCATTCATAAGGGGATTATCGTTGAAGTTGCTGAGACAGAAGAACTCTTCATA
AATCCAGTTCATCCTTATACCAAGTCACTTCTATCAGCAGTGCCAATTCCAGACCCAATACTGGAGAGGAAGAAAAAATT
AATTGTCTACTCAGTAGACCAGCACGACTATTCAGTTGATAAACCTGAGATGGTAGAAATAAAACCAGGACATTTTGTAT
GGGCTAACAAAGCTGAAGTTGCTAAATATCAAAAAGAACTATAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (230-262)

• ABC transporter (ABC_tran) (26-178)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMG 18311	83.66	99.674	0.834
amiF	Streptococcus thermophilus LMD-9	83.333	99.674	0.831
amiF	Streptococcus salivarius strain HSISS4	83.333	99.674	0.831