Detailed information    

insolico Bioinformatically predicted

Overview

Name   stkP   Type   Regulator
Locus tag   FGL23_RS02920 Genome accession   NZ_LR594049
Coordinates   627399..629246 (+) Length   615 a.a.
NCBI ID   WP_061603667.1    Uniprot ID   -
Organism   Streptococcus gordonii strain NCTC10231     
Function   require for competence development; phosphorylate ComE (predicted from homology)   
Competence regulation

Genomic Context

Location: 622399..634246
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL23_RS02905 (NCTC10231_00578) fmt 624403..625338 (+) 936 WP_061603665.1 methionyl-tRNA formyltransferase -
  FGL23_RS02910 (NCTC10231_00579) rsmB 625328..626641 (+) 1314 WP_061603666.1 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB -
  FGL23_RS02915 (NCTC10231_00580) - 626662..627402 (+) 741 WP_061599617.1 Stp1/IreP family PP2C-type Ser/Thr phosphatase -
  FGL23_RS02920 (NCTC10231_00581) stkP 627399..629246 (+) 1848 WP_061603667.1 Stk1 family PASTA domain-containing Ser/Thr kinase Regulator
  FGL23_RS02925 (NCTC10231_00582) liaF 629419..630117 (+) 699 WP_061603680.1 cell wall-active antibiotics response protein LiaF -
  FGL23_RS02930 (NCTC10231_00583) - 630114..631115 (+) 1002 WP_061603668.1 sensor histidine kinase -
  FGL23_RS02935 (NCTC10231_00584) - 631117..631749 (+) 633 WP_061603669.1 response regulator transcription factor -
  FGL23_RS02940 (NCTC10231_00585) - 631837..633240 (+) 1404 WP_061603670.1 bifunctional Cof-type HAD-IIB family hydrolase/peptidylprolyl isomerase -
  FGL23_RS02945 (NCTC10231_00586) - 633237..633623 (+) 387 WP_060552930.1 S1 RNA-binding domain-containing protein -

Sequence

Protein


Download         Length: 615 a.a.        Molecular weight: 66889.98 Da        Isoelectric Point: 6.8454

>NTDB_id=1127953 FGL23_RS02920 WP_061603667.1 627399..629246(+) (stkP) [Streptococcus gordonii strain NCTC10231]
MIQIGKIFAGRYKIIKQIGRGGMADVYLARDLILDGEEVAVKVLRTNYQTDPIAVARFQREARAMADLDHPHIVRVTDIG
EEDGQQYLAMEYVAGLDLKRYIKEHAPLSNEEAVRIMGQILLAMRLAHARGIVHRDLKPQNVLLTPDGNAKVTDFGIAVA
FAETSLTQTNSMLGSVHYLSPEQARGSKATFQSDIYAMGIIFYEMLTGHIPYDGDSAVTIALQHFQKPLPSIIAENANVP
QSLENVIIKATAKKLTDRYQSVSDMYVDLSSCLSPERRNEKKLMFDDAVKADTKTLPKIPKVTPPVASRVKNDPATDVEQ
QAPQVAPPTKPKKKRHLRARYKVLLAAVFLVIAAFLALLYLTPSNKQVPDVTGKTVAEAREAIEKVNLKVGEEIEENSDE
VASGMIIRTDPVAGTQRKEGSTVNLVVSKGAKTLIMEDYTGQTTAQAVERLTDVLKVPKNNIKVEEVETNDAEEGTIFEQ
TPAAGATYDLTSNTKIVLKVAKAVSTIEMPNFGSLQYTYANARNYLISLGIPSSNIERVVDRSVVSSQSDLVTSQSPATG
PVNPKKVKVTLYVTEATTPSSSSSSSSNSSSSSKNTSSSSSSEDETSASSSTHGD

Nucleotide


Download         Length: 1848 bp        

>NTDB_id=1127953 FGL23_RS02920 WP_061603667.1 627399..629246(+) (stkP) [Streptococcus gordonii strain NCTC10231]
ATGATTCAAATCGGCAAAATTTTTGCCGGGCGATATAAGATCATCAAACAAATTGGCCGAGGTGGGATGGCAGATGTCTA
TCTAGCTAGGGATTTGATTTTAGATGGTGAAGAAGTGGCGGTTAAGGTTCTTAGAACCAATTACCAGACGGATCCTATCG
CTGTTGCACGTTTTCAACGAGAAGCGCGTGCTATGGCGGATTTGGACCATCCACATATCGTTCGTGTCACCGATATTGGT
GAAGAAGACGGCCAGCAATATTTGGCTATGGAATATGTAGCTGGCTTGGATCTCAAACGATACATTAAAGAGCACGCTCC
TTTGTCGAACGAGGAAGCCGTTCGAATTATGGGCCAAATTCTTTTAGCCATGCGTTTGGCACACGCTCGTGGGATTGTTC
ACCGAGATTTAAAACCACAAAACGTTCTCTTGACTCCAGATGGAAATGCCAAGGTAACGGACTTTGGGATTGCGGTTGCC
TTTGCAGAAACAAGTTTGACCCAAACAAATTCCATGCTGGGCAGTGTCCATTACCTGTCTCCTGAGCAGGCGCGTGGTTC
GAAAGCAACTTTCCAAAGTGATATTTATGCGATGGGTATCATCTTTTATGAGATGCTGACTGGTCATATTCCTTATGATG
GGGATAGTGCAGTGACGATCGCTCTACAACATTTCCAAAAACCATTGCCGTCCATTATTGCTGAAAATGCCAATGTTCCG
CAGTCTTTGGAAAATGTTATTATTAAGGCTACTGCTAAAAAGCTGACAGACCGGTATCAAAGTGTTTCGGATATGTATGT
AGATCTGTCTAGTTGCCTGTCACCTGAACGGCGGAATGAAAAGAAACTGATGTTTGATGACGCGGTAAAAGCGGATACTA
AGACACTTCCAAAGATTCCGAAAGTTACACCTCCTGTAGCTTCTAGAGTAAAAAATGATCCAGCTACAGATGTTGAACAG
CAAGCCCCTCAAGTTGCACCACCAACAAAACCTAAGAAAAAGCGTCATTTGAGAGCGAGATACAAGGTTTTGTTAGCTGC
AGTATTTCTGGTCATTGCTGCTTTTCTGGCTTTGCTCTATCTAACACCATCTAATAAGCAGGTTCCAGATGTTACTGGCA
AGACCGTTGCTGAAGCTAGAGAAGCGATTGAAAAAGTCAATTTAAAAGTTGGCGAAGAGATAGAAGAGAATAGTGATGAA
GTAGCTTCAGGGATGATTATTCGCACAGATCCAGTGGCAGGAACTCAGAGAAAAGAAGGCAGTACAGTTAACTTAGTTGT
TTCTAAGGGAGCTAAAACGCTGATTATGGAAGACTATACTGGTCAAACTACTGCCCAAGCTGTTGAGAGACTCACTGATG
TTCTAAAAGTTCCAAAAAACAATATTAAAGTTGAAGAAGTTGAAACAAACGATGCAGAAGAAGGAACAATTTTTGAACAG
ACACCAGCTGCGGGAGCTACCTATGATCTCACTTCAAATACGAAGATTGTTTTAAAAGTAGCCAAAGCAGTATCAACGAT
TGAAATGCCAAACTTTGGTAGTCTTCAATATACTTATGCAAACGCTCGGAATTATCTGATTTCTCTAGGAATTCCATCTA
GTAACATTGAAAGAGTCGTGGATCGTTCGGTTGTGTCGAGTCAATCTGATTTGGTGACATCACAATCTCCAGCAACTGGA
CCAGTTAATCCTAAGAAGGTAAAAGTGACCTTGTATGTCACTGAAGCAACTACTCCAAGTTCAAGTTCTAGCTCGAGCTC
GAATTCTTCTTCTAGCAGTAAGAATACGTCATCGTCAAGTTCTTCAGAAGATGAAACTTCAGCATCAAGTTCGACACATG
GTGATTAA

Domains

Predicted by InterproScan.

PASTA domain (PASTA)

(435-502)

PASTA domain (PASTA)

(367-429)

PASTA domain (PASTA)

(508-574)

Protein kinase domain (Pkinase)

(12-243)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  stkP Streptococcus pneumoniae TIGR4

70.385

84.553

0.595
  stkP Streptococcus pneumoniae D39

70.192

84.553

0.593
  stkP Streptococcus pneumoniae R6

70.192

84.553

0.593
  stkP Streptococcus pneumoniae Rx1

70

84.553

0.592
  pknB Streptococcus mutans UA159

57.941

93.171

0.54
  stkP/pknB Streptococcus salivarius strain HSISS4

58.029

89.106

0.517

Multiple sequence alignment