Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | FGL21_RS09355 | Genome accession | NZ_LR594047 |
| Coordinates | 1872867..1873358 (-) | Length | 163 a.a. |
| NCBI ID | WP_014612571.1 | Uniprot ID | - |
| Organism | Streptococcus dysgalactiae subsp. equisimilis strain NCTC11554 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1867867..1878358
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FGL21_RS09340 (NCTC11554_01946) | - | 1870595..1871539 (+) | 945 | WP_003059456.1 | magnesium transporter CorA family protein | - |
| FGL21_RS09345 (NCTC11554_01947) | - | 1871671..1872330 (+) | 660 | WP_014612570.1 | DUF1129 domain-containing protein | - |
| FGL21_RS09350 (NCTC11554_01948) | rpsR | 1872463..1872702 (-) | 240 | WP_002983142.1 | 30S ribosomal protein S18 | - |
| FGL21_RS09355 (NCTC11554_01949) | ssb | 1872867..1873358 (-) | 492 | WP_014612571.1 | single-stranded DNA-binding protein | Machinery gene |
| FGL21_RS09360 (NCTC11554_01950) | rpsF | 1873380..1873670 (-) | 291 | WP_002983117.1 | 30S ribosomal protein S6 | - |
| FGL21_RS11570 (NCTC11554_01951) | - | 1874635..1874928 (-) | 294 | WP_014612572.1 | hypothetical protein | - |
| FGL21_RS09370 (NCTC11554_01952) | mutY | 1875093..1876259 (+) | 1167 | WP_014612573.1 | A/G-specific adenine glycosylase | - |
| FGL21_RS09375 (NCTC11554_01953) | trxA | 1876310..1876624 (-) | 315 | WP_003052691.1 | thioredoxin | - |
| FGL21_RS09380 (NCTC11554_01954) | - | 1876851..1878170 (+) | 1320 | WP_014612574.1 | FAD-containing oxidoreductase | - |
Sequence
Protein
Download Length: 163 a.a. Molecular weight: 17951.73 Da Isoelectric Point: 4.8894
>NTDB_id=1127877 FGL21_RS09355 WP_014612571.1 1872867..1873358(-) (ssb) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC11554]
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSTGSFNGGFNNNTSSSNGYSAPAQQTPNFGRDDSPFGNSNPMDISDDD
LPF
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSTGSFNGGFNNNTSSSNGYSAPAQQTPNFGRDDSPFGNSNPMDISDDD
LPF
Nucleotide
Download Length: 492 bp
>NTDB_id=1127877 FGL21_RS09355 WP_014612571.1 1872867..1873358(-) (ssb) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC11554]
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAGGATGCAGAACTTCGTTACACACCAAGTCAAGTAGCTGTGGC
TACCTTCACACTTGCTGTTAACCGTACCTTTAAAAGCCAAAATGGTGAACGCGAGGCAGATTTCATTAACTGTGTGATCT
GGCGTCAACCGGCTGAAAATTTAGCGAACTGGGCTAAAAAAGGTGCTTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGGACAACGTGTCTATGTAACAGAAGTTGTTGCAGATAATTTCCAAATGTTGGAAAGTCGTGC
TACACGTGAAGGTGGCTCAACTGGCTCATTTAATGGTGGTTTTAACAATAACACTTCATCATCAAACGGTTACTCAGCGC
CTGCACAACAAACGCCTAACTTTGGAAGAGATGATAGCCCATTTGGGAACTCAAACCCGATGGATATCTCAGATGACGAT
CTTCCATTCTAG
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAGGATGCAGAACTTCGTTACACACCAAGTCAAGTAGCTGTGGC
TACCTTCACACTTGCTGTTAACCGTACCTTTAAAAGCCAAAATGGTGAACGCGAGGCAGATTTCATTAACTGTGTGATCT
GGCGTCAACCGGCTGAAAATTTAGCGAACTGGGCTAAAAAAGGTGCTTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGGACAACGTGTCTATGTAACAGAAGTTGTTGCAGATAATTTCCAAATGTTGGAAAGTCGTGC
TACACGTGAAGGTGGCTCAACTGGCTCATTTAATGGTGGTTTTAACAATAACACTTCATCATCAAACGGTTACTCAGCGC
CTGCACAACAAACGCCTAACTTTGGAAGAGATGATAGCCCATTTGGGAACTCAAACCCGATGGATATCTCAGATGACGAT
CTTCCATTCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
59.884 |
100 |
0.632 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
57.558 |
100 |
0.607 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
57.547 |
65.031 |
0.374 |
| ssb | Glaesserella parasuis strain SC1401 |
32.961 |
100 |
0.362 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
54.128 |
66.871 |
0.362 |