Detailed information
Bioinformatically predicted
Overview
| Name | coiA | Type | Machinery gene |
| Locus tag | FGL05_RS05990 | Genome accession | NZ_LR594044 |
| Coordinates | 1233168..1234130 (-) | Length | 320 a.a. |
| NCBI ID | WP_111712680.1 | Uniprot ID | - |
| Organism | Streptococcus lutetiensis strain NCTC8796 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 1228168..1239130
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FGL05_RS05965 (NCTC8796_01268) | - | 1228289..1229350 (-) | 1062 | WP_111712682.1 | peptidyl-prolyl cis-trans isomerase | - |
| FGL05_RS05970 (NCTC8796_01269) | - | 1229420..1230121 (-) | 702 | WP_111712681.1 | O-methyltransferase | - |
| FGL05_RS05975 (NCTC8796_01270) | - | 1230169..1230780 (-) | 612 | WP_020916435.1 | HAD-IA family hydrolase | - |
| FGL05_RS05980 (NCTC8796_01271) | - | 1230800..1231297 (-) | 498 | WP_111713073.1 | GNAT family N-acetyltransferase | - |
| FGL05_RS05985 (NCTC8796_01272) | pepF | 1231366..1233168 (-) | 1803 | WP_020916433.1 | oligoendopeptidase F | Regulator |
| FGL05_RS05990 (NCTC8796_01273) | coiA | 1233168..1234130 (-) | 963 | WP_111712680.1 | competence protein CoiA family protein | Machinery gene |
| FGL05_RS05995 (NCTC8796_01274) | - | 1234180..1234896 (-) | 717 | WP_111712679.1 | pseudouridine synthase | - |
| FGL05_RS06000 (NCTC8796_01275) | nagB | 1234970..1235677 (-) | 708 | WP_111712678.1 | glucosamine-6-phosphate deaminase | - |
| FGL05_RS06005 (NCTC8796_01276) | - | 1235810..1236316 (-) | 507 | WP_058833169.1 | VIT1/CCC1 transporter family protein | - |
| FGL05_RS06010 (NCTC8796_01277) | queA | 1236480..1237508 (+) | 1029 | WP_020916428.1 | tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA | - |
| FGL05_RS06015 (NCTC8796_01278) | - | 1237559..1238284 (-) | 726 | WP_043894998.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| FGL05_RS06020 (NCTC8796_01279) | - | 1238386..1238997 (-) | 612 | WP_020916426.1 | superoxide dismutase | - |
Sequence
Protein
Download Length: 320 a.a. Molecular weight: 37667.95 Da Isoelectric Point: 9.1387
>NTDB_id=1127680 FGL05_RS05990 WP_111712680.1 1233168..1234130(-) (coiA) [Streptococcus lutetiensis strain NCTC8796]
MLSALDEKDRLVSLLDEISEKQTFTCPACHSPVRLRHGQIMRPHFAHVSLKNCDFYSENESDEHLQLKAALYQALSQSEN
VTVEAVLPELHQVADVLVNDNLALEVQCSRLSEKRLRERTTSYRKAGFNVLWLLGETLWLGERLTPLQRHFLYFSQNMGF
HLWELDAKQRLVRLHYLIYEDWHGKVHYLTKSCSLSGNLMAFFRLPYQKQKLSTYDVNQDSNLLSYIQRQLSSRNTSWLK
RQEKAYLQGKNLLTLPLSAYFPQVRPPEVKDGFCQISQDLSDFYETFRRYYQNQSEKGVQRLYPPAYYGRMVNNAKKRRT
MLSALDEKDRLVSLLDEISEKQTFTCPACHSPVRLRHGQIMRPHFAHVSLKNCDFYSENESDEHLQLKAALYQALSQSEN
VTVEAVLPELHQVADVLVNDNLALEVQCSRLSEKRLRERTTSYRKAGFNVLWLLGETLWLGERLTPLQRHFLYFSQNMGF
HLWELDAKQRLVRLHYLIYEDWHGKVHYLTKSCSLSGNLMAFFRLPYQKQKLSTYDVNQDSNLLSYIQRQLSSRNTSWLK
RQEKAYLQGKNLLTLPLSAYFPQVRPPEVKDGFCQISQDLSDFYETFRRYYQNQSEKGVQRLYPPAYYGRMVNNAKKRRT
Nucleotide
Download Length: 963 bp
>NTDB_id=1127680 FGL05_RS05990 WP_111712680.1 1233168..1234130(-) (coiA) [Streptococcus lutetiensis strain NCTC8796]
ATGCTGTCTGCTCTTGATGAAAAAGATCGTTTGGTCTCCTTGTTAGATGAGATTTCTGAAAAGCAAACTTTTACTTGTCC
AGCCTGTCATTCACCAGTTCGACTGAGACATGGTCAGATTATGCGTCCGCATTTTGCACATGTGTCGCTTAAAAATTGTG
ATTTTTATAGTGAAAATGAAAGTGACGAACATTTGCAGTTAAAAGCAGCACTTTACCAAGCTCTTTCACAAAGTGAAAAT
GTAACCGTAGAAGCTGTCTTGCCAGAGCTGCATCAGGTTGCAGATGTTTTGGTCAATGATAACTTAGCTCTGGAAGTTCA
GTGTTCTAGGCTATCAGAAAAACGTCTCAGAGAACGAACGACTTCTTATCGCAAGGCGGGCTTTAATGTTTTATGGCTTT
TGGGAGAAACATTATGGCTTGGTGAGCGCTTAACGCCCCTACAGCGACACTTTCTTTACTTTTCACAGAATATGGGGTTT
CATCTGTGGGAGTTAGATGCTAAGCAAAGGCTTGTTCGACTACATTATTTAATTTATGAAGATTGGCACGGTAAAGTGCA
TTATTTGACGAAAAGCTGCTCGCTCTCAGGAAACTTAATGGCATTTTTCAGACTTCCTTATCAAAAACAAAAGCTCTCAA
CTTACGACGTTAATCAAGACTCAAATTTATTAAGCTATATTCAAAGGCAACTATCTTCTCGAAATACTTCTTGGTTAAAG
CGCCAAGAAAAGGCTTATTTACAAGGGAAAAATCTTCTCACACTGCCTTTGTCAGCTTATTTTCCGCAAGTTAGGCCCCC
AGAAGTTAAGGATGGCTTTTGTCAAATTTCACAAGACTTATCAGACTTTTATGAGACCTTTAGGCGTTATTATCAAAATC
AAAGTGAAAAAGGTGTTCAAAGACTTTACCCGCCAGCTTATTATGGTAGAATGGTTAATAATGCCAAGAAAAGGAGAACA
TAA
ATGCTGTCTGCTCTTGATGAAAAAGATCGTTTGGTCTCCTTGTTAGATGAGATTTCTGAAAAGCAAACTTTTACTTGTCC
AGCCTGTCATTCACCAGTTCGACTGAGACATGGTCAGATTATGCGTCCGCATTTTGCACATGTGTCGCTTAAAAATTGTG
ATTTTTATAGTGAAAATGAAAGTGACGAACATTTGCAGTTAAAAGCAGCACTTTACCAAGCTCTTTCACAAAGTGAAAAT
GTAACCGTAGAAGCTGTCTTGCCAGAGCTGCATCAGGTTGCAGATGTTTTGGTCAATGATAACTTAGCTCTGGAAGTTCA
GTGTTCTAGGCTATCAGAAAAACGTCTCAGAGAACGAACGACTTCTTATCGCAAGGCGGGCTTTAATGTTTTATGGCTTT
TGGGAGAAACATTATGGCTTGGTGAGCGCTTAACGCCCCTACAGCGACACTTTCTTTACTTTTCACAGAATATGGGGTTT
CATCTGTGGGAGTTAGATGCTAAGCAAAGGCTTGTTCGACTACATTATTTAATTTATGAAGATTGGCACGGTAAAGTGCA
TTATTTGACGAAAAGCTGCTCGCTCTCAGGAAACTTAATGGCATTTTTCAGACTTCCTTATCAAAAACAAAAGCTCTCAA
CTTACGACGTTAATCAAGACTCAAATTTATTAAGCTATATTCAAAGGCAACTATCTTCTCGAAATACTTCTTGGTTAAAG
CGCCAAGAAAAGGCTTATTTACAAGGGAAAAATCTTCTCACACTGCCTTTGTCAGCTTATTTTCCGCAAGTTAGGCCCCC
AGAAGTTAAGGATGGCTTTTGTCAAATTTCACAAGACTTATCAGACTTTTATGAGACCTTTAGGCGTTATTATCAAAATC
AAAGTGAAAAAGGTGTTCAAAGACTTTACCCGCCAGCTTATTATGGTAGAATGGTTAATAATGCCAAGAAAAGGAGAACA
TAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| coiA | Streptococcus mitis NCTC 12261 |
51.78 |
96.563 |
0.5 |
| coiA | Streptococcus pneumoniae Rx1 |
51.133 |
96.563 |
0.494 |
| coiA | Streptococcus pneumoniae D39 |
51.133 |
96.563 |
0.494 |
| coiA | Streptococcus pneumoniae R6 |
51.133 |
96.563 |
0.494 |
| coiA | Streptococcus pneumoniae TIGR4 |
50.809 |
96.563 |
0.491 |
| coiA | Lactococcus lactis subsp. cremoris KW2 |
42.042 |
100 |
0.437 |