Detailed information NTG1127534

Bioinformatically predicted

Overview

• Name: lytF
• Type: Regulator
• Locus tag: FGL12_RS10615
• Genome accession: NZ_LR594041
• Coordinates: 2183084..2184733 (+)
• Length: 549 a.a.
• NCBI ID: WP_138101396.1
• Uniprot ID: -
• Organism: Streptococcus gordonii strain NCTC9124
• Function: cell lysis (predicted from homology) Cell lysis

Genomic Context

Location: 2178084..2189733

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FGL12_RS10585 (NCTC9124_02136)	-	2178229..2178456 (-)	228	WP_012131050.1	hypothetical protein	-
FGL12_RS10590 (NCTC9124_02137)	-	2178476..2178739 (-)	264	WP_125367710.1	hypothetical protein	-
FGL12_RS10595 (NCTC9124_02138)	purK	2178741..2179832 (-)	1092	WP_138101393.1	5-(carboxyamino)imidazole ribonucleotide synthase	-
FGL12_RS10600 (NCTC9124_02139)	purE	2179819..2180307 (-)	489	WP_012131053.1	5-(carboxyamino)imidazole ribonucleotide mutase	-
FGL12_RS10605 (NCTC9124_02140)	-	2180327..2181520 (-)	1194	WP_138101395.1	ATP-grasp domain-containing protein	-
FGL12_RS10610 (NCTC9124_02141)	purD	2181580..2182839 (-)	1260	WP_012131055.1	phosphoribosylamine--glycine ligase	-
FGL12_RS10615 (NCTC9124_02142)	lytF	2183084..2184733 (+)	1650	WP_138101396.1	GBS Bsp-like repeat-containing protein	Regulator
FGL12_RS10620 (NCTC9124_02143)	comB	2184852..2186210 (-)	1359	WP_138101398.1	competence pheromone export protein ComB	Regulator
FGL12_RS10625 (NCTC9124_02144)	comA	2186220..2188373 (-)	2154	WP_138101400.1	peptide cleavage/export ABC transporter ComA	Regulator
FGL12_RS10630 (NCTC9124_02145)	rpsD	2188827..2189438 (-)	612	WP_008810013.1	30S ribosomal protein S4	-

Sequence

Protein

• Length: 549 a.a.
• Molecular weight: 60525.28 Da
• Isoelectric Point: 9.0248

>NTDB_id=1127534 FGL12_RS10615 WP_138101396.1 2183084..2184733(+) (lytF) [Streptococcus gordonii strain NCTC9124]
MKKYKNFLLLSATLLTSLSAPLAAANEQFSPSQLTAMTSEVYVQLEGQTAIVQYQPTAAQEAYTIQHAVWSEEGGQDDIV
WYSADQSTTRIDLSQHKGQGKFLIETYLNVNSVKYHLSSKSVFLNKPVQSTEKTVPEQQDSTSSNNATPQAPAEPKPTNP
APTPAPAPATNRVENPRNSYPKVEERNKSLPPQKVAQPKVAPPQAEPNNNKPLQASAARVPAEPVRDSKPLISITNINKE
NGTYTVRVQENPYSKKIKSVQVPIWSTANQSNLKWYEASQTGNGSFSVQFDIRNHQQLYGNYINHVYITYEDGSRAGYVA
ENVNLPQPAPQPLTPSLQVVHKGQSNYQVILQNSFGDGHILFPIWSDINGQDDLRWYTANSLGNGRYSLDFNANNHIGDG
LYHVHVYRQSGGKVTGVMASNFQVTRPTVAVRKPLIHTNDPSNTYPVGECTWGAKALAPWAGNWWGNGGDWAASARRAGF
RVGSTPQVGAIACWTDGGYGHVGVVTHVDSHKRIQIQESNYAGQRYIANFRGWFDPTIAQGTVSYIYPN

Nucleotide

• Length: 1650 bp

>NTDB_id=1127534 FGL12_RS10615 WP_138101396.1 2183084..2184733(+) (lytF) [Streptococcus gordonii strain NCTC9124]
ATGAAAAAATACAAAAATTTCTTACTGCTTTCAGCAACCTTGTTGACCTCACTATCTGCTCCATTAGCTGCAGCGAATGA
ACAGTTTAGCCCATCCCAACTGACGGCTATGACCAGCGAAGTTTACGTTCAGCTTGAAGGACAAACAGCGATTGTTCAGT
ACCAACCGACCGCTGCGCAAGAAGCTTATACCATCCAACATGCCGTCTGGTCTGAGGAGGGAGGCCAAGACGATATTGTC
TGGTATTCAGCTGATCAAAGCACGACCAGGATTGACTTGTCTCAACACAAGGGCCAGGGTAAATTTCTCATCGAGACTTA
TCTCAATGTGAATAGTGTCAAATATCACTTGAGTAGTAAATCGGTCTTTCTAAACAAGCCGGTTCAATCAACCGAAAAAA
CTGTCCCTGAACAGCAAGACAGCACTTCGTCTAACAATGCCACACCTCAAGCACCGGCTGAGCCAAAACCAACTAACCCA
GCACCTACTCCAGCTCCGGCTCCCGCGACCAATAGAGTTGAAAATCCTCGGAACTCCTATCCAAAAGTCGAAGAGCGAAA
CAAATCTCTTCCTCCTCAAAAGGTAGCTCAACCAAAGGTGGCGCCCCCTCAGGCAGAGCCAAACAACAACAAACCTCTGC
AAGCTTCAGCTGCTAGAGTACCGGCAGAGCCTGTCAGAGACAGCAAGCCACTCATCAGTATTACCAACATTAATAAGGAA
AATGGAACCTATACCGTAAGGGTCCAAGAAAACCCTTATTCCAAGAAAATTAAAAGTGTGCAGGTGCCTATTTGGAGCAC
CGCAAATCAAAGCAATCTTAAATGGTATGAGGCTTCACAAACAGGCAACGGAAGCTTCTCCGTTCAATTCGATATCCGAA
ATCACCAGCAGCTTTACGGCAACTATATCAATCACGTCTACATTACCTATGAGGACGGTAGCCGAGCTGGCTATGTCGCT
GAAAATGTCAATCTTCCTCAGCCTGCACCCCAGCCACTAACTCCGAGTCTGCAAGTGGTTCATAAAGGTCAATCAAACTA
TCAAGTTATCTTACAAAATAGTTTCGGTGACGGCCATATTCTCTTCCCCATCTGGTCAGATATTAATGGCCAAGACGACC
TCCGCTGGTATACAGCCAACTCTCTAGGTAATGGGCGCTATTCGTTAGATTTCAACGCCAACAATCATATCGGTGACGGT
CTCTATCATGTCCATGTCTATCGACAATCTGGCGGGAAAGTAACTGGGGTCATGGCCTCTAATTTTCAAGTAACACGCCC
AACGGTAGCTGTGAGAAAACCTCTTATCCATACGAACGACCCAAGTAATACTTACCCTGTTGGTGAATGCACATGGGGTG
CCAAGGCTCTCGCTCCTTGGGCAGGAAACTGGTGGGGAAATGGTGGGGACTGGGCAGCCAGTGCTCGCCGAGCAGGATTC
CGTGTAGGATCGACACCTCAGGTCGGAGCTATTGCCTGCTGGACAGACGGCGGATACGGACATGTCGGTGTCGTCACGCA
TGTTGATTCACATAAGCGTATCCAAATTCAGGAATCCAACTACGCTGGACAGCGCTATATCGCTAATTTCCGTGGCTGGT
TTGACCCAACCATCGCTCAGGGCACGGTTTCCTATATCTACCCAAATTAA

Domains

Predicted by InterproScan.

• CHAP domain (CHAP) (443-520)

• GBS Bsp-like repeat (GBS_Bsp-like) (344-414)

• GBS Bsp-like repeat (GBS_Bsp-like) (234-319)

• GBS Bsp-like repeat (GBS_Bsp-like) (53-116)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
lytF	Streptococcus gordonii str. Challis substr. CH1	98.725	100	0.987
lytF	Streptococcus gordonii strain NCTC7865	95.264	100	0.953