Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   FGK97_RS01720 Genome accession   NZ_LR594037
Coordinates   331946..332701 (+) Length   251 a.a.
NCBI ID   WP_003025888.1    Uniprot ID   -
Organism   Streptococcus anginosus strain NCTC11064     
Function   degradation of ComW (predicted from homology)   
Competence regulation

Related MGE


Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type MGE coordinates Gene coordinates Relative position Distance (bp)
IScluster/Tn 330467..331818 331946..332701 flank 128


Gene organization within MGE regions


Location: 330467..332701
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGK97_RS01720 (NCTC11064_00346) mecA 331946..332701 (+) 756 WP_003025888.1 adaptor protein MecA Regulator

Sequence


Protein


Download         Length: 251 a.a.        Molecular weight: 29095.86 Da        Isoelectric Point: 4.1403

>NTDB_id=1127401 FGK97_RS01720 WP_003025888.1 331946..332701(+) (mecA) [Streptococcus anginosus strain NCTC11064]
MEMKQISDTTIKITIKLEDLEERGMEMADFLVPQEKTEEFFYAILDELEMPESFLDSGMLSFRVTPKPDRLDVFVTKSKI
DKNLNFDDLADLPDVEELSQMSPDEFLKTLEKNIFEKSKDDMEAVRSLETAESDDNTSTSDMEEQDENSDELTQKYIYYI
LKFSSLKEAIVFSKTVDYAVNTSELYKMDDHYYLTILVDIEGHPKRYPAWLLASMREHAEDTDVTRAVLQEHGYLLLVNE
AVASLKKVKCL

Nucleotide


Download         Length: 756 bp        

>NTDB_id=1127401 FGK97_RS01720 WP_003025888.1 331946..332701(+) (mecA) [Streptococcus anginosus strain NCTC11064]
ATGGAAATGAAGCAAATTAGTGATACAACGATTAAAATCACGATAAAATTAGAGGATTTAGAGGAACGTGGGATGGAAAT
GGCAGATTTTCTAGTCCCACAAGAAAAAACAGAAGAGTTTTTCTATGCGATTTTAGATGAGTTGGAAATGCCAGAAAGCT
TTTTAGATAGTGGCATGCTCAGTTTTCGTGTGACACCAAAGCCCGACCGATTGGATGTCTTTGTCACCAAGTCTAAGATT
GATAAGAATCTGAACTTCGATGATTTGGCGGATTTGCCAGATGTAGAAGAGTTGTCTCAAATGTCTCCTGATGAATTTTT
AAAGACATTAGAAAAAAATATTTTTGAGAAAAGTAAAGACGATATGGAGGCTGTTCGTTCTTTGGAAACGGCGGAATCAG
ACGATAACACAAGCACTTCTGATATGGAAGAACAAGATGAAAATAGTGACGAGCTAACGCAAAAATATATTTATTACATT
TTGAAATTTTCCAGCCTGAAAGAAGCAATTGTCTTTTCTAAGACAGTAGATTATGCTGTCAATACTTCGGAGTTGTACAA
AATGGACGATCACTATTATTTGACAATTCTGGTGGATATTGAGGGACACCCGAAGCGTTATCCAGCTTGGCTCCTTGCCT
CTATGCGTGAACATGCAGAAGACACAGATGTGACGAGAGCTGTTTTGCAAGAGCACGGTTATTTATTGCTTGTCAACGAG
GCGGTTGCCAGTCTTAAAAAGGTTAAATGCTTATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Streptococcus pneumoniae Rx1

65.323

98.805

0.645

  mecA Streptococcus pneumoniae D39

65.323

98.805

0.645

  mecA Streptococcus pneumoniae R6

65.323

98.805

0.645

  mecA Streptococcus pneumoniae TIGR4

65.323

98.805

0.645

  mecA Streptococcus mutans UA159

49.597

98.805

0.49

  mecA Streptococcus thermophilus LMD-9

46.275

100

0.47

  mecA Streptococcus thermophilus LMG 18311

45.882

100

0.466


Multiple sequence alignment