Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   FGK81_RS00155 Genome accession   NZ_LR590466
Coordinates   27168..28391 (-) Length   407 a.a.
NCBI ID   WP_002981947.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC8193     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 22168..33391
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGK81_RS00135 (NCTC8193_00027) - 23182..23379 (-) 198 WP_002981933.1 DUF951 domain-containing protein -
  FGK81_RS00140 (NCTC8193_00028) dnaN 23454..24590 (-) 1137 WP_011184038.1 DNA polymerase III subunit beta -
  FGK81_RS00145 (NCTC8193_00029) dnaA 24745..26100 (-) 1356 WP_002987659.1 chromosomal replication initiator protein DnaA -
  FGK81_RS00150 (NCTC8193_00030) spo0J 26303..27079 (-) 777 WP_002981939.1 ParB/RepB/Spo0J family partition protein Regulator
  FGK81_RS00155 (NCTC8193_00031) htrA 27168..28391 (-) 1224 WP_002981947.1 S1C family serine protease Regulator
  FGK81_RS00160 (NCTC8193_00032) rlmH 28603..29082 (+) 480 WP_011889262.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  FGK81_RS00170 (NCTC8193_00034) - 29498..30596 (+) 1099 Protein_17 IS30 family transposase -

Sequence


Protein


Download         Length: 407 a.a.        Molecular weight: 42758.40 Da        Isoelectric Point: 7.3920

>NTDB_id=1126762 FGK81_RS00155 WP_002981947.1 27168..28391(-) (htrA) [Streptococcus pyogenes strain NCTC8193]
MPSMKHILKSLSVLLIGFLGGLIAIITFNNLYPHSPSKINSGKATTSNMVFNNTTNTTKAVKAVQNAVVSVINYQDNPSS
SLSNPYTKLFGEGRSKENKDAELSIFSEGSGVIYRKDGNSAYVVTNNHVIDGAKRIEILMADGSKVVGELVGADTYSDLA
VVKISSDKIKTVAEFADSTKLNVGEVAIAIGSPLGTQYANSVTQGIVSSLSRTVTLKNENGETVSTNAIQTDAAINPGNS
GGPLINIEGQVIGINSSKISSTPTGSNGNSGAVEGIGFAIPSTDVIKIIKQLETNGEVIRPALGISMVNLNDLSTNALSQ
INIPTSVTGGIVVAEVKEGMPASGKLAQYDVITEIDGKIVNSISDLQSSLYGHDINDTIKVTFYRGTTKKKADIKLTKTT
QDLTKTQ

Nucleotide


Download         Length: 1224 bp        

>NTDB_id=1126762 FGK81_RS00155 WP_002981947.1 27168..28391(-) (htrA) [Streptococcus pyogenes strain NCTC8193]
ATGCCAAGTATGAAACATATCTTAAAATCCTTAAGTGTTTTACTAATTGGATTTTTAGGAGGATTAATAGCAATTATTAC
ATTTAATAATCTCTACCCACATTCTCCTTCAAAAATAAATTCAGGTAAGGCAACAACTAGTAATATGGTTTTTAACAACA
CAACCAATACTACTAAAGCTGTCAAAGCTGTTCAAAATGCAGTTGTATCAGTTATTAATTATCAAGATAACCCTTCTTCA
TCCCTTTCTAACCCTTATACAAAACTCTTTGGAGAAGGGCGTTCAAAAGAGAATAAGGATGCTGAATTATCTATTTTTAG
TGAAGGATCTGGGGTCATTTATCGAAAAGATGGCAACTCCGCTTACGTTGTTACTAATAACCATGTTATCGACGGAGCTA
AACGGATTGAAATTCTTATGGCAGACGGATCTAAAGTTGTTGGTGAATTAGTTGGAGCTGATACTTATTCGGATTTAGCT
GTTGTTAAGATCTCTTCAGATAAGATAAAAACAGTAGCTGAATTTGCAGATTCTACAAAACTAAATGTTGGAGAAGTTGC
TATTGCTATCGGCAGCCCACTAGGAACACAATACGCTAATTCTGTTACTCAAGGAATCGTCTCTAGTTTAAGTCGTACTG
TAACTTTAAAAAACGAGAATGGTGAGACTGTCTCAACAAATGCTATTCAGACAGATGCTGCTATCAACCCTGGAAACTCT
GGTGGACCACTAATTAATATTGAGGGGCAAGTAATCGGAATTAATTCAAGTAAAATTTCTTCTACCCCAACTGGTAGCAA
CGGTAATAGTGGTGCTGTTGAAGGAATTGGTTTTGCTATCCCATCTACTGATGTTATTAAAATTATTAAACAACTAGAAA
CTAATGGTGAAGTTATCAGACCTGCTCTTGGAATATCCATGGTCAATTTAAATGACTTATCCACAAATGCTCTTAGCCAA
ATTAATATTCCAACTAGTGTAACTGGTGGTATTGTAGTAGCAGAAGTTAAGGAAGGAATGCCGGCATCTGGCAAACTTGC
TCAGTACGATGTGATTACAGAAATTGATGGCAAAATAGTTAATTCAATTAGTGATTTACAAAGTAGTCTATACGGACACG
ATATTAATGATACTATTAAAGTAACTTTTTATAGAGGAACTACAAAGAAAAAAGCAGATATCAAATTAACAAAAACTACT
CAAGATTTGACTAAAACGCAGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

61.634

99.263

0.612

  htrA Streptococcus gordonii str. Challis substr. CH1

55.473

98.771

0.548

  htrA Streptococcus mitis NCTC 12261

53.317

100

0.533

  htrA Streptococcus pneumoniae Rx1

53.071

100

0.531

  htrA Streptococcus pneumoniae D39

53.071

100

0.531

  htrA Streptococcus pneumoniae R6

53.071

100

0.531

  htrA Streptococcus pneumoniae TIGR4

53.071

100

0.531


Multiple sequence alignment