Detailed information NTG1126599

Bioinformatically predicted

Overview

• Name: comFC/cflB
• Type: Machinery gene
• Locus tag: E0F34_RS11055
• Genome accession: NZ_LR536843
• Coordinates: 2047470..2048132 (-)
• Length: 220 a.a.
• NCBI ID: WP_061649835.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain GPSC55 substr. ST3774 isolate b04a6400-1f66-11e7-b93e-3c4a9275d6c8
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2042470..2053132

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E0F34_RS11030 (SAMEA104035599_02102)	-	2042621..2042887 (-)	267	WP_001278167.1	Veg family protein	-
E0F34_RS11035 (SAMEA104035599_02103)	dnaB	2042889..2044241 (-)	1353	WP_050137283.1	replicative DNA helicase	-
E0F34_RS11040 (SAMEA104035599_02104)	rplI	2044284..2044736 (-)	453	WP_000864220.1	50S ribosomal protein L9	-
E0F34_RS11045 (SAMEA104035599_02105)	-	2044733..2046706 (-)	1974	WP_000715109.1	DHH family phosphoesterase	-
E0F34_RS11050 (SAMEA104035599_02106)	hpf	2046842..2047390 (-)	549	WP_000599107.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
E0F34_RS11055 (SAMEA104035599_02107)	comFC/cflB	2047470..2048132 (-)	663	WP_061649835.1	ComF family protein	Machinery gene
E0F34_RS11060 (SAMEA104035599_02108)	comFA/cflA	2048129..2049427 (-)	1299	WP_130885257.1	DEAD/DEAH box helicase	Machinery gene
E0F34_RS11065 (SAMEA104035599_02109)	-	2049483..2050118 (+)	636	WP_000395738.1	YigZ family protein	-
E0F34_RS11070 (SAMEA104035599_02110)	cysK	2050403..2051329 (+)	927	WP_130885258.1	cysteine synthase A	-
E0F34_RS11075 (SAMEA104035599_02111)	tsf	2051450..2052490 (-)	1041	WP_000808062.1	translation elongation factor Ts	-

Sequence

Protein

• Length: 220 a.a.
• Molecular weight: 25198.07 Da
• Isoelectric Point: 6.8148

>NTDB_id=1126599 E0F34_RS11055 WP_061649835.1 2047470..2048132(-) (comFC/cflB) [Streptococcus pneumoniae strain GPSC55 substr. ST3774 isolate b04a6400-1f66-11e7-b93e-3c4a9275d6c8]
MKCLLCGQTMKTVLTFSSLLLLRNDDSCLCSDCDSTFERIGEENCPNCMKTELSTKCQDCQLWCKEGVEVSHRAIFTYNQ
AMKDFFSRYKFDGDFLLRKVFASFLSEELKKYKEYQFVVIPLSPDIYANRGFNQVEGLVEAAGFEYLDLLEKREERASSS
KNRSERLGTELPFFIKSGVTIPKKILLIDDIYTTGATINRVKKLLEEAGAKDVKTFSLVR

Nucleotide

• Length: 663 bp

>NTDB_id=1126599 E0F34_RS11055 WP_061649835.1 2047470..2048132(-) (comFC/cflB) [Streptococcus pneumoniae strain GPSC55 substr. ST3774 isolate b04a6400-1f66-11e7-b93e-3c4a9275d6c8]
ATGAAGTGCTTGTTATGTGGGCAGACTATGAAGACTGTTTTAACTTTTAGTAGTCTCTTACTTCTGAGGAATGATGACTC
TTGTCTTTGTTCAGACTGTGATTCTACTTTTGAAAGAATTGGGGAAGAGAACTGTCCAAATTGTATGAAAACAGAGTTGT
CAACAAAGTGTCAAGATTGTCAACTTTGGTGTAAAGAGGGAGTTGAAGTCAGTCATAGAGCGATTTTTACTTACAATCAA
GCTATGAAGGATTTTTTCAGTCGGTATAAGTTTGATGGAGACTTCCTGTTAAGAAAAGTTTTCGCTTCATTTTTAAGTGA
GGAGTTGAAAAAGTACAAAGAGTATCAATTTGTTGTAATTCCCCTAAGTCCTGATATATATGCTAATAGAGGATTTAATC
AGGTTGAGGGCTTGGTAGAGGCAGCAGGCTTTGAGTATCTGGATTTATTAGAGAAAAGAGAAGAGAGAGCCAGTTCTTCT
AAAAATCGTTCAGAGCGCTTGGGGACAGAACTTCCTTTCTTTATTAAAAGTGGAGTCACTATTCCTAAAAAAATCCTACT
TATAGATGATATCTATACTACAGGAGCAACTATAAATCGTGTTAAGAAACTGTTGGAAGAAGCTGGTGCTAAGGATGTAA
AAACATTTTCCCTTGTAAGATGA

Domains

Predicted by InterproScan.

• Phosphoribosyl transferase domain (Pribosyltran) (154-219)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC/cflB	Streptococcus pneumoniae TIGR4	99.545	100	0.995
comFC/cflB	Streptococcus pneumoniae Rx1	99.091	100	0.991
comFC/cflB	Streptococcus pneumoniae D39	99.091	100	0.991
comFC/cflB	Streptococcus pneumoniae R6	99.091	100	0.991
comFC/cflB	Streptococcus mitis NCTC 12261	91.364	100	0.914
comFC/cflB	Streptococcus mitis SK321	90.909	100	0.909