Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   E0F34_RS06090 Genome accession   NZ_LR536843
Coordinates   1115260..1115997 (-) Length   245 a.a.
NCBI ID   WP_000782676.1    Uniprot ID   A0A064C3U8
Organism   Streptococcus pneumoniae strain GPSC55 substr. ST3774 isolate b04a6400-1f66-11e7-b93e-3c4a9275d6c8     
Function   degradation of ComW (predicted from homology)   
Competence regulation

Genomic Context


Location: 1110260..1120997
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E0F34_RS06070 (SAMEA104035599_01151) msrB 1111719..1112657 (-) 939 WP_000818203.1 peptide-methionine (R)-S-oxide reductase MsrB -
  E0F34_RS11910 - 1112724..1112876 (-) 153 WP_001835993.1 hypothetical protein -
  E0F34_RS06080 (SAMEA104035599_01152) thrB 1112952..1113821 (-) 870 WP_000692438.1 homoserine kinase -
  E0F34_RS06085 (SAMEA104035599_01153) - 1113823..1115109 (-) 1287 WP_000216383.1 homoserine dehydrogenase -
  E0F34_RS06090 (SAMEA104035599_01154) mecA 1115260..1115997 (-) 738 WP_000782676.1 adaptor protein MecA Regulator
  E0F34_RS06095 (SAMEA104035599_01155) - 1116197..1117231 (-) 1035 WP_000461498.1 hypothetical protein -
  E0F34_RS06100 (SAMEA104035599_01156) - 1117260..1118696 (-) 1437 WP_000565075.1 O-antigen polysaccharide polymerase Wzy family protein -
  E0F34_RS06105 (SAMEA104035599_01157) - 1118712..1119698 (-) 987 WP_000446988.1 glycosyltransferase family 2 protein -
  E0F34_RS06110 (SAMEA104035599_01158) - 1119700..1120803 (-) 1104 WP_000225891.1 glycosyltransferase -

Sequence


Protein


Download         Length: 245 a.a.        Molecular weight: 28381.18 Da        Isoelectric Point: 4.0199

>NTDB_id=1126554 E0F34_RS06090 WP_000782676.1 1115260..1115997(-) (mecA) [Streptococcus pneumoniae strain GPSC55 substr. ST3774 isolate b04a6400-1f66-11e7-b93e-3c4a9275d6c8]
MKMKQISDTTLKITMSLEDLMDRGMEIADFLVPQEKTEEFFYAILDELEMPDSFLDTGMLSFRVTPKPDKVDVFVTKSKI
DQNLDFEDLSDLPDMEELAQMSPDEFIKTLEKSIADKTKDDIEAIQSLEQVEAKEEEQEQAEQEAESKKEPYIYYILSFA
KLADLVAFAKTVTFEMETSELYKMNERYYLTILVDIENHPSPYPAWLLARMREFADDSDISRSVLQEYGQVLMSHDAVLN
LQKIG

Nucleotide


Download         Length: 738 bp        

>NTDB_id=1126554 E0F34_RS06090 WP_000782676.1 1115260..1115997(-) (mecA) [Streptococcus pneumoniae strain GPSC55 substr. ST3774 isolate b04a6400-1f66-11e7-b93e-3c4a9275d6c8]
ATGAAAATGAAACAAATTAGTGATACAACTTTAAAAATCACGATGTCTTTAGAGGATTTGATGGATCGTGGAATGGAGAT
TGCTGACTTTCTCGTTCCTCAAGAAAAAACAGAAGAGTTCTTTTATGCTATCTTGGATGAGCTAGAGATGCCTGATAGCT
TTCTGGATACAGGCATGTTGAGCTTCCGTGTGACTCCAAAACCTGATAAGGTAGATGTCTTTGTGACCAAGTCAAAGATT
GACCAAAATCTAGATTTTGAAGACTTATCGGATTTGCCAGATATGGAAGAATTGGCTCAAATGTCTCCAGATGAATTTAT
CAAAACCCTGGAAAAAAGCATCGCAGACAAAACCAAGGATGATATCGAAGCCATTCAATCTCTTGAGCAAGTTGAAGCCA
AGGAAGAAGAGCAAGAGCAGGCTGAACAAGAAGCTGAGAGTAAGAAAGAACCTTACATCTACTACATCCTTTCTTTTGCT
AAGTTGGCTGACTTGGTAGCTTTTGCCAAGACAGTGACTTTTGAAATGGAAACTTCTGAACTCTACAAAATGAACGAGCG
CTATTATTTGACCATTTTAGTGGATATTGAAAATCATCCAAGCCCATATCCAGCTTGGCTGTTGGCCCGTATGCGCGAGT
TTGCAGACGATAGTGATATCAGTCGCTCAGTCTTACAAGAGTATGGTCAAGTCTTGATGAGTCACGATGCAGTGCTCAAT
CTGCAAAAAATCGGCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A064C3U8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Streptococcus pneumoniae Rx1

99.592

100

0.996

  mecA Streptococcus pneumoniae D39

99.592

100

0.996

  mecA Streptococcus pneumoniae R6

99.592

100

0.996

  mecA Streptococcus pneumoniae TIGR4

99.184

100

0.992

  mecA Streptococcus thermophilus LMD-9

47.791

100

0.486

  mecA Streptococcus thermophilus LMG 18311

47.39

100

0.482

  mecA Streptococcus mutans UA159

48.163

100

0.482


Multiple sequence alignment