Detailed information NTG1125939

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: PMYSY11_RS19985
• Genome accession: NZ_LR215729
• Coordinates: 4373747..4374811 (-)
• Length: 354 a.a.
• NCBI ID: WP_069898373.1
• Uniprot ID: A0A1I7ACA9
• Organism: Pseudomonas marincola strain YSy11
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4368747..4379811

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PMYSY11_RS19960 (PMYSY11_4118)	aroK	4369333..4369851 (-)	519	WP_150547832.1	shikimate kinase AroK	-
PMYSY11_RS19965 (PMYSY11_4119)	pilQ	4369856..4371958 (-)	2103	WP_069898568.1	type IV pilus secretin PilQ	Machinery gene
PMYSY11_RS19970 (PMYSY11_4120)	pilP	4372013..4372537 (-)	525	WP_069898370.1	type 4a pilus biogenesis lipoprotein PilP	-
PMYSY11_RS19975 (PMYSY11_4121)	pilO	4372534..4373157 (-)	624	WP_069898371.1	type 4a pilus biogenesis protein PilO	-
PMYSY11_RS19980 (PMYSY11_4122)	-	4373154..4373747 (-)	594	WP_069898372.1	PilN domain-containing protein	-
PMYSY11_RS19985 (PMYSY11_4123)	pilM	4373747..4374811 (-)	1065	WP_069898373.1	pilus assembly protein PilM	Machinery gene
PMYSY11_RS19990 (PMYSY11_4124)	-	4374992..4377484 (+)	2493	WP_090510174.1	penicillin-binding protein 1A	-
PMYSY11_RS19995 (PMYSY11_4125)	-	4378009..4378584 (+)	576	WP_150547833.1	fimbrial protein	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 38142.42 Da
• Isoelectric Point: 4.5001

>NTDB_id=1125939 PMYSY11_RS19985 WP_069898373.1 4373747..4374811(-) (pilM) [Pseudomonas marincola strain YSy11]
MLGLFNKKANTLLGIDISSTSVKLLELSRSGSRYKVEAYAVEPLPPNAVVEKNIAELEGVGQAISRVLVKAKTNLKTAAV
AVAGSAVITKTIEMEAGLTDDDLENQLKIEADQYIPYPLEEVSIDFEVQGVSPRNAERVEVLLAACRKENVEVREAALAL
AGLTAKVVDVEAYALERSFDLLAQQLGSGDNDQTVAIVDIGATMTTLSVLHKGRTIYTREQLFGGKQLTEEIQRRYGLSV
EEAGRAKKQGGLPDDYDSEVLQPFKEAVVQQVSRSLQFFFAAGQFNDVDYILLAGGTSSIPDLDRLIQQRLGTQTQVANP
FADMALSSKVNAGALASDAPALMIACGLAMRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=1125939 PMYSY11_RS19985 WP_069898373.1 4373747..4374811(-) (pilM) [Pseudomonas marincola strain YSy11]
GTGCTAGGGCTCTTCAATAAGAAAGCGAATACGCTTCTGGGGATTGATATCAGCTCAACCTCAGTCAAGCTCCTCGAATT
GAGTCGCTCAGGAAGCCGCTACAAAGTAGAGGCTTATGCTGTAGAGCCGCTCCCACCAAATGCTGTGGTTGAGAAAAACA
TCGCCGAGCTCGAGGGGGTCGGTCAGGCCATATCCAGAGTATTGGTAAAAGCAAAAACCAATCTAAAGACTGCTGCGGTT
GCAGTCGCTGGGTCTGCAGTTATTACCAAGACTATCGAGATGGAAGCCGGTCTGACTGATGACGATCTTGAGAACCAGTT
AAAGATTGAAGCCGATCAGTACATTCCCTATCCGCTCGAAGAAGTCTCGATTGATTTCGAAGTGCAGGGCGTCTCGCCGC
GAAATGCTGAGCGAGTTGAAGTTCTGCTGGCGGCTTGTCGTAAAGAGAACGTCGAAGTTCGTGAGGCTGCACTGGCACTT
GCCGGCTTGACCGCCAAGGTCGTCGACGTGGAAGCGTACGCGCTGGAGCGTTCGTTCGATCTGTTGGCGCAGCAATTGGG
CAGTGGCGACAACGATCAAACGGTCGCAATCGTTGATATCGGCGCGACCATGACCACGCTCAGCGTTCTGCATAAAGGCC
GCACGATCTACACCCGTGAGCAGCTCTTTGGCGGCAAGCAGCTGACTGAAGAAATTCAGCGTCGCTATGGCTTGTCTGTT
GAGGAAGCTGGACGTGCGAAGAAGCAAGGCGGTCTTCCGGATGACTATGACAGCGAGGTTTTGCAGCCGTTCAAAGAGGC
GGTTGTGCAACAAGTCTCGCGTTCGTTGCAGTTCTTCTTTGCTGCCGGACAATTCAACGATGTCGATTACATCTTGCTGG
CGGGTGGCACCTCGTCCATTCCTGATCTTGATCGCTTGATTCAGCAGCGCCTTGGCACTCAAACCCAGGTGGCGAATCCA
TTCGCCGACATGGCGTTGAGCAGCAAGGTCAATGCGGGCGCTCTGGCCAGTGATGCTCCGGCATTGATGATTGCCTGTGG
TCTGGCAATGAGGAGTTTCGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

3D structure

• AlphaFold DB: A0A1I7ACA9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	56.78	100	0.568
comM	Acinetobacter nosocomialis M2	56.78	100	0.568
comM	Acinetobacter baylyi ADP1	54.802	100	0.548
pilM	Legionella pneumophila strain ERS1305867	47.458	100	0.475