Detailed information
Bioinformatically predicted
Overview
| Name | comE1/comEA | Type | Machinery gene |
| Locus tag | EL215_RS01390 | Genome accession | NZ_LR134481 |
| Coordinates | 277774..278124 (-) | Length | 116 a.a. |
| NCBI ID | WP_126469718.1 | Uniprot ID | - |
| Organism | Haemophilus parainfluenzae strain NCTC10665 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 272774..283124
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL215_RS01370 (NCTC10665_00272) | pflA | 273109..273849 (-) | 741 | WP_126469714.1 | pyruvate formate lyase 1-activating protein | - |
| EL215_RS01375 (NCTC10665_00273) | - | 273966..274256 (-) | 291 | WP_005636456.1 | putative quinol monooxygenase | - |
| EL215_RS01380 (NCTC10665_00274) | pflB | 274339..276651 (-) | 2313 | WP_164757046.1 | formate C-acetyltransferase | - |
| EL215_RS01385 (NCTC10665_00275) | focA | 276705..277559 (-) | 855 | WP_049357930.1 | formate transporter FocA | - |
| EL215_RS01390 (NCTC10665_00276) | comE1/comEA | 277774..278124 (-) | 351 | WP_126469718.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| EL215_RS01395 (NCTC10665_00277) | - | 278269..278586 (-) | 318 | WP_049357927.1 | heavy metal-binding domain-containing protein | - |
| EL215_RS01400 (NCTC10665_00278) | rdgB | 278625..279224 (-) | 600 | WP_049357925.1 | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase | - |
| EL215_RS01405 (NCTC10665_00279) | - | 279356..279727 (+) | 372 | WP_049357924.1 | DUF305 domain-containing protein | - |
| EL215_RS01410 (NCTC10665_00280) | ispH | 279776..280720 (-) | 945 | WP_049372702.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| EL215_RS01415 (NCTC10665_00281) | lspA | 280717..281208 (-) | 492 | WP_126469720.1 | signal peptidase II | - |
| EL215_RS01420 (NCTC10665_00282) | glmU | 281325..282695 (-) | 1371 | WP_126469722.1 | bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU | - |
Sequence
Protein
Download Length: 116 a.a. Molecular weight: 12748.53 Da Isoelectric Point: 8.6056
>NTDB_id=1123026 EL215_RS01390 WP_126469718.1 277774..278124(-) (comE1/comEA) [Haemophilus parainfluenzae strain NCTC10665]
MKLIKHLFSSLFVATTMLSSQVFAEEQVAEQAQPQAQVQQQTASQTTQQAVSDKLNINTASASEIQKALIGIGAKKAEAI
VQYREKHGNFTMAEQLLEVQGIGKATLEKNRDRIAF
MKLIKHLFSSLFVATTMLSSQVFAEEQVAEQAQPQAQVQQQTASQTTQQAVSDKLNINTASASEIQKALIGIGAKKAEAI
VQYREKHGNFTMAEQLLEVQGIGKATLEKNRDRIAF
Nucleotide
Download Length: 351 bp
>NTDB_id=1123026 EL215_RS01390 WP_126469718.1 277774..278124(-) (comE1/comEA) [Haemophilus parainfluenzae strain NCTC10665]
ATGAAATTGATAAAACATTTATTTAGTTCATTATTTGTTGCAACCACAATGTTGAGCTCGCAAGTGTTTGCAGAAGAACA
AGTGGCTGAACAGGCTCAACCTCAAGCGCAAGTTCAGCAACAAACTGCATCACAAACGACACAACAAGCAGTGAGTGATA
AATTAAATATCAATACCGCCAGCGCATCAGAAATTCAAAAAGCGCTAATTGGTATTGGTGCGAAAAAGGCGGAAGCCATT
GTACAGTATCGTGAAAAGCACGGTAATTTCACTATGGCAGAACAATTGCTTGAAGTACAAGGCATTGGTAAAGCAACCTT
AGAGAAAAACCGCGATCGTATCGCGTTTTAA
ATGAAATTGATAAAACATTTATTTAGTTCATTATTTGTTGCAACCACAATGTTGAGCTCGCAAGTGTTTGCAGAAGAACA
AGTGGCTGAACAGGCTCAACCTCAAGCGCAAGTTCAGCAACAAACTGCATCACAAACGACACAACAAGCAGTGAGTGATA
AATTAAATATCAATACCGCCAGCGCATCAGAAATTCAAAAAGCGCTAATTGGTATTGGTGCGAAAAAGGCGGAAGCCATT
GTACAGTATCGTGAAAAGCACGGTAATTTCACTATGGCAGAACAATTGCTTGAAGTACAAGGCATTGGTAAAGCAACCTT
AGAGAAAAACCGCGATCGTATCGCGTTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comE1/comEA | Haemophilus influenzae Rd KW20 |
65.487 |
97.414 |
0.638 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
55.752 |
97.414 |
0.543 |
| comEA | Acinetobacter baylyi ADP1 |
40.157 |
100 |
0.44 |
| comEA | Vibrio cholerae C6706 |
40.541 |
95.69 |
0.388 |
| comEA | Vibrio cholerae strain A1552 |
40.541 |
95.69 |
0.388 |