Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   EL268_RS09195 Genome accession   NZ_LR134338
Coordinates   1801810..1802088 (-) Length   92 a.a.
NCBI ID   WP_007721243.1    Uniprot ID   J2GYM8
Organism   Brevibacillus brevis strain NCTC2611     
Function   repress competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1796810..1807088
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL268_RS09170 (NCTC2611_01875) - 1797244..1798452 (+) 1209 WP_106654559.1 PLP-dependent aminotransferase family protein -
  EL268_RS09175 (NCTC2611_01876) - 1798508..1799326 (-) 819 WP_106654560.1 alpha/beta fold hydrolase -
  EL268_RS09180 (NCTC2611_01877) - 1799471..1800319 (-) 849 WP_007721249.1 family 1 encapsulin nanocompartment shell protein -
  EL268_RS09185 (NCTC2611_01878) - 1800357..1800956 (-) 600 WP_048034009.1 IMEF encapsulin system ferritin-like cargo protein -
  EL268_RS09190 (NCTC2611_01879) - 1801287..1801568 (+) 282 WP_007721245.1 DUF2325 domain-containing protein -
  EL268_RS32695 (NCTC2611_01880) - 1801633..1801779 (+) 147 WP_162837758.1 hypothetical protein -
  EL268_RS09195 (NCTC2611_01881) htrA 1801810..1802088 (-) 279 WP_007721243.1 S1C family serine protease Regulator
  EL268_RS09200 (NCTC2611_01882) - 1802111..1803562 (-) 1452 WP_106654561.1 recombinase family protein -
  EL268_RS09205 (NCTC2611_01883) - 1803675..1803995 (-) 321 WP_017250460.1 helix-turn-helix domain-containing protein -
  EL268_RS09210 (NCTC2611_01884) - 1804197..1805291 (+) 1095 WP_106654562.1 YheC/YheD family protein -
  EL268_RS33250 - 1805356..1805559 (-) 204 Protein_1763 trypsin-like peptidase domain-containing protein -
  EL268_RS09220 (NCTC2611_01885) - 1806056..1806544 (+) 489 WP_232030364.1 PadR family transcriptional regulator -

Sequence


Protein


Download         Length: 92 a.a.        Molecular weight: 9771.26 Da        Isoelectric Point: 6.1950

>NTDB_id=1121931 EL268_RS09195 WP_007721243.1 1801810..1802088(-) (htrA) [Brevibacillus brevis strain NCTC2611]
MATGGSPLGLENSVTAGIISAKNRRLQVAKRMYEEIFQTDAAINPGNSGGPLINLNGEVVGLNAFIIQSSQCLGFAIGID
ALKMQLEQYVFK

Nucleotide


Download         Length: 279 bp        

>NTDB_id=1121931 EL268_RS09195 WP_007721243.1 1801810..1802088(-) (htrA) [Brevibacillus brevis strain NCTC2611]
ATGGCGACAGGTGGTTCCCCACTGGGTTTGGAAAATTCTGTGACAGCGGGAATCATCAGTGCCAAAAACCGTCGCTTACA
GGTTGCGAAGCGTATGTACGAAGAAATTTTTCAGACGGATGCTGCCATTAACCCAGGAAATAGCGGAGGTCCACTCATTA
ATTTGAATGGGGAAGTCGTTGGTCTCAATGCATTCATCATTCAATCCAGCCAATGCTTGGGCTTCGCCATCGGAATTGAC
GCCCTCAAAATGCAACTGGAGCAATACGTATTCAAGTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB J2GYM8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mitis NCTC 12261

46.939

100

0.5

  htrA Streptococcus pneumoniae Rx1

45.918

100

0.489

  htrA Streptococcus pneumoniae D39

45.918

100

0.489

  htrA Streptococcus pneumoniae R6

45.918

100

0.489

  htrA Streptococcus pneumoniae TIGR4

45.918

100

0.489

  htrA Streptococcus mutans UA159

47.727

95.652

0.457

  htrA Streptococcus gordonii str. Challis substr. CH1

41.237

100

0.435


Multiple sequence alignment