Detailed information NTG1120880

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: EL115_RS02865
• Genome accession: NZ_LR134307
• Coordinates: 562170..563132 (+)
• Length: 320 a.a.
• NCBI ID: WP_003069867.1
• Uniprot ID: -
• Organism: Streptococcus milleri strain NCTC10708
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 557170..568132

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL115_RS02845 (NCTC10708_00575)	-	557900..559261 (+)	1362	WP_039676819.1	DUF1958 domain-containing protein	-
EL115_RS02850 (NCTC10708_00576)	-	559341..560510 (+)	1170	WP_126441261.1	MFS transporter	-
EL115_RS02855 (NCTC10708_00577)	-	560805..561791 (+)	987	Protein_537	6-phospho-beta-glucosidase	-
EL115_RS02860 (NCTC10708_00578)	celB	561785..562081 (+)	297	Protein_538	PTS cellobiose transporter subunit IIC	-
EL115_RS02865 (NCTC10708_00579)	coiA	562170..563132 (+)	963	WP_003069867.1	competence protein CoiA	Machinery gene
EL115_RS02870 (NCTC10708_00580)	pepF	563152..564954 (+)	1803	WP_126441262.1	oligoendopeptidase F	Regulator
EL115_RS02875 (NCTC10708_00581)	-	564955..565638 (+)	684	WP_006270129.1	O-methyltransferase	-
EL115_RS02880 (NCTC10708_00582)	prsA	565745..566683 (+)	939	WP_003069861.1	peptidylprolyl isomerase PrsA	-
EL115_RS02885	-	566821..567393 (+)	573	WP_080983117.1	LURP-one-related/scramblase family protein	-

Sequence

Protein

• Length: 320 a.a.
• Molecular weight: 37901.66 Da
• Isoelectric Point: 8.9908

>NTDB_id=1120880 EL115_RS02865 WP_003069867.1 562170..563132(+) (coiA) [Streptococcus milleri strain NCTC10708]
MLIACQENGKLLNAVEDTVNPLNRFLCPACLEAVRFKKGRVMRPHFAHVSLKECHFYTENESAEHLNLKAALFTWARKSN
HAVQVEAYLPKLQQIADLLVEKQIALEVQCSSLSQKRLKERTDSYHQHGYHVLWLLGKKLWLKDSLTNLQKDFLYFSQNM
GFYLWELDDKKQELRLKYLIHEDLHGRAQYKVQSFPFGQGSLLTVLRTPFQQQEMTSFLAKEDKNICRYVRQQLYYQQPK
WMKLQAELYQAGDNLLTKTTSDFYPQVQPVRASSFCQIFQDLTPYYQQFSAYYEKEKNKNFQILYPPAFYTRILSVFMIE

Nucleotide

• Length: 963 bp

>NTDB_id=1120880 EL115_RS02865 WP_003069867.1 562170..563132(+) (coiA) [Streptococcus milleri strain NCTC10708]
ATGCTAATAGCTTGTCAGGAAAATGGAAAACTACTAAATGCTGTGGAAGATACGGTAAATCCGCTGAATAGATTTCTTTG
TCCAGCTTGTTTGGAGGCGGTCCGTTTTAAAAAAGGAAGAGTCATGCGACCGCATTTTGCTCATGTTTCTTTGAAAGAAT
GTCATTTTTATACGGAGAATGAAAGCGCAGAACACCTGAATTTGAAAGCTGCTTTGTTTACTTGGGCCAGAAAGTCTAAT
CATGCAGTTCAAGTGGAAGCGTATTTACCTAAATTGCAACAAATTGCAGATCTGTTAGTAGAGAAACAGATTGCGCTTGA
AGTTCAATGCAGTTCGCTGAGTCAAAAGCGCTTAAAAGAGCGTACGGACAGTTATCATCAGCACGGTTATCATGTACTTT
GGCTATTAGGAAAGAAACTTTGGCTGAAAGATTCTTTAACTAATTTACAAAAAGATTTTCTTTATTTCAGTCAAAATATG
GGCTTTTATCTGTGGGAATTGGATGATAAAAAGCAGGAGCTTCGGCTCAAGTATCTGATTCACGAAGATTTGCATGGCCG
AGCTCAATATAAGGTTCAGTCTTTTCCTTTTGGTCAGGGCAGCCTTTTGACTGTTCTGCGAACGCCCTTTCAACAGCAGG
AGATGACCAGTTTTCTAGCAAAAGAAGATAAAAATATTTGCCGTTATGTTCGTCAACAACTCTATTATCAACAACCTAAA
TGGATGAAATTACAGGCAGAATTGTATCAAGCGGGTGATAATTTATTGACTAAAACGACTAGTGATTTTTATCCGCAGGT
TCAGCCTGTTCGTGCCAGCTCTTTTTGTCAGATTTTTCAAGACCTCACACCTTATTACCAACAATTTTCAGCTTATTATG
AAAAGGAAAAGAATAAAAATTTCCAAATTCTCTATCCTCCAGCTTTTTATACAAGGATTTTATCAGTATTTATGATAGAA
TAG

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (22-249)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus mitis NCTC 12261	53.125	100	0.531
coiA	Streptococcus pneumoniae TIGR4	52.812	100	0.528
coiA	Streptococcus pneumoniae Rx1	52.812	100	0.528
coiA	Streptococcus pneumoniae D39	52.812	100	0.528
coiA	Streptococcus pneumoniae R6	52.812	100	0.528
coiA	Lactococcus lactis subsp. cremoris KW2	43.519	100	0.441