Detailed information    

insolico Bioinformatically predicted

Overview

Name   ciaH   Type   Regulator
Locus tag   EL097_RS08585 Genome accession   NZ_LR134293
Coordinates   1693607..1694917 (-) Length   436 a.a.
NCBI ID   WP_003048304.1    Uniprot ID   A0AAV3FT04
Organism   Streptococcus canis strain NCTC12191     
Function   Required for optimal comC expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 1688607..1699917
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL097_RS08555 (NCTC12191_01709) - 1688754..1689143 (-) 390 WP_003048314.1 cytidine deaminase -
  EL097_RS08560 (NCTC12191_01710) deoC 1689130..1689792 (-) 663 WP_003048312.1 deoxyribose-phosphate aldolase -
  EL097_RS08565 (NCTC12191_01711) - 1689808..1691085 (-) 1278 WP_003048310.1 pyrimidine-nucleoside phosphorylase -
  EL097_RS08570 (NCTC12191_01712) - 1691072..1691671 (-) 600 WP_003048308.1 class I SAM-dependent methyltransferase -
  EL097_RS08575 (NCTC12191_01713) coaA 1691939..1692859 (+) 921 WP_003048306.1 type I pantothenate kinase -
  EL097_RS08580 (NCTC12191_01714) rpsT 1692913..1693161 (+) 249 WP_009881183.1 30S ribosomal protein S20 -
  EL097_RS08585 (NCTC12191_01715) ciaH 1693607..1694917 (-) 1311 WP_003048304.1 cell wall metabolism sensor histidine kinase WalK Regulator
  EL097_RS08590 (NCTC12191_01716) ciaR 1694910..1695584 (-) 675 WP_003048303.1 response regulator transcription factor Regulator
  EL097_RS08595 (NCTC12191_01717) - 1695787..1698324 (-) 2538 WP_003048301.1 M1 family metallopeptidase -
  EL097_RS08605 (NCTC12191_01718) phoU 1698530..1699183 (-) 654 WP_003048299.1 phosphate signaling complex protein PhoU -

Sequence

Protein


Download         Length: 436 a.a.        Molecular weight: 49764.32 Da        Isoelectric Point: 9.4415

>NTDB_id=1120517 EL097_RS08585 WP_003048304.1 1693607..1694917(-) (ciaH) [Streptococcus canis strain NCTC12191]
MSKLKKEILSDQYTHFFHFFAVFTGIFVIMTIIILQIMRFGVYSSVDSSLISVSNNASSYANRTMARISSFYFDSENNII
KALPDSDSSKLLGSPAANTDIILFSANGTILNSFNAFSNYQNFHLDERRLGTIVTTSLVNFYGQEEKYHTITVRVHIKNY
PAVAYMMAVVNVDQLDSANERYEQIIIIVMVIFWLISILASIYLSKWSRKPILESYEKQKMFVENASHELRTPLAVLQNR
LESLFRKPNETILENSEHLASSLDEVRNMRILTTNLLNLARRDDGINPQWTDLDAQFFDTIFKNYQLVVEESGKVFRSDN
QVNRILKMDKALLKQLMTILVDNAIKYTDKNGVVEIKVKTTDKTLLISVIDNGPGIKDEEKKKIFDRFYRVDKARTRQTG
GFGLGLALAQQIVTSLKGSITVKDNFPKGSIFEVKL

Nucleotide


Download         Length: 1311 bp        

>NTDB_id=1120517 EL097_RS08585 WP_003048304.1 1693607..1694917(-) (ciaH) [Streptococcus canis strain NCTC12191]
ATGAGTAAATTAAAAAAAGAGATTCTGTCAGATCAGTACACTCACTTTTTCCATTTTTTTGCGGTCTTTACAGGTATTTT
TGTCATTATGACCATTATTATTTTACAGATTATGAGGTTTGGGGTTTATTCGTCTGTTGATAGTAGCCTGATTTCTGTTA
GTAATAATGCTAGTAGTTATGCCAATCGAACCATGGCTAGAATATCCTCCTTCTACTTTGATTCTGAAAATAATATTATT
AAGGCGCTACCTGACTCTGATAGTTCAAAATTACTAGGCTCCCCTGCAGCTAATACAGATATTATTTTGTTCAGTGCTAA
TGGGACGATTTTAAATTCCTTCAATGCCTTCTCCAATTACCAAAATTTTCATCTGGACGAACGACGGTTAGGAACCATTG
TGACAACTAGTCTCGTGAATTTTTATGGTCAAGAAGAAAAGTACCATACGATAACTGTTAGGGTCCATATCAAAAATTAT
CCTGCTGTCGCTTATATGATGGCTGTTGTCAATGTGGATCAATTGGATAGCGCTAATGAACGCTATGAGCAAATCATCAT
CATTGTGATGGTTATCTTTTGGCTGATTTCCATTTTAGCTAGTATTTATTTATCTAAGTGGAGTCGAAAACCGATTTTGG
AAAGTTATGAAAAGCAAAAGATGTTTGTGGAAAATGCCAGCCATGAATTAAGAACCCCTCTAGCTGTTTTACAAAACCGC
TTGGAATCCCTCTTTCGAAAACCTAACGAAACTATTTTGGAAAATAGTGAGCACCTTGCCTCTAGTTTGGACGAAGTCCG
AAATATGCGTATTCTAACGACCAATCTATTGAATTTGGCCAGGCGAGATGACGGTATCAATCCGCAATGGACAGATTTGG
ATGCTCAATTCTTTGATACCATTTTTAAGAACTATCAATTAGTTGTTGAAGAATCTGGCAAAGTCTTTCGCTCCGATAAT
CAAGTCAATCGCATCTTGAAAATGGACAAGGCATTATTAAAACAACTCATGACGATTTTAGTCGATAATGCCATCAAATA
CACCGATAAAAATGGAGTAGTTGAGATAAAGGTCAAAACAACCGATAAAACCTTGCTCATTTCGGTTATTGATAATGGGC
CAGGGATAAAAGACGAAGAGAAGAAAAAGATTTTTGATCGATTCTATCGGGTTGATAAAGCTAGAACACGCCAGACAGGT
GGCTTTGGCTTAGGATTAGCATTAGCCCAACAGATTGTGACGTCATTAAAAGGAAGTATCACAGTAAAAGATAACTTCCC
TAAAGGTAGTATTTTTGAAGTCAAATTATAA

Domains

Predicted by InterproScan.

His Kinase A (phospho-acceptor) domain (HisKA)

(220-285)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(329-436)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ciaH Streptococcus mutans UA159

58.124

100

0.583
  ciaH Streptococcus pneumoniae Rx1

50.913

100

0.511
  ciaH Streptococcus pneumoniae D39

50.913

100

0.511
  ciaH Streptococcus pneumoniae R6

50.913

100

0.511
  ciaH Streptococcus pneumoniae TIGR4

50.913

100

0.511

Multiple sequence alignment