Detailed information
Bioinformatically predicted
Overview
| Name | micB | Type | Regulator |
| Locus tag | EL087_RS03220 | Genome accession | NZ_LR134288 |
| Coordinates | 660406..661758 (+) | Length | 450 a.a. |
| NCBI ID | WP_126406807.1 | Uniprot ID | - |
| Organism | Streptococcus milleri strain NCTC11169 | ||
| Function | repress competence development (predicted from homology) Competence regulation |
||
Genomic Context
Location: 655406..666758
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL087_RS03195 (NCTC11169_00645) | ccpA | 655563..656567 (+) | 1005 | WP_003040018.1 | catabolite control protein A | Regulator |
| EL087_RS03200 (NCTC11169_00646) | - | 656747..657745 (+) | 999 | WP_126406804.1 | glycosyltransferase family 4 protein | - |
| EL087_RS03205 (NCTC11169_00647) | - | 657747..659060 (+) | 1314 | WP_003039969.1 | glycosyltransferase family 4 protein | - |
| EL087_RS03210 (NCTC11169_00648) | - | 659087..659428 (+) | 342 | WP_003040057.1 | hypothetical protein | - |
| EL087_RS03215 (NCTC11169_00649) | micA | 659712..660413 (+) | 702 | WP_003040015.1 | response regulator YycF | Regulator |
| EL087_RS03220 (NCTC11169_00650) | micB | 660406..661758 (+) | 1353 | WP_126406807.1 | cell wall metabolism sensor histidine kinase VicK | Regulator |
| EL087_RS03225 (NCTC11169_00651) | vicX | 661761..662564 (+) | 804 | WP_003027672.1 | MBL fold metallo-hydrolase | Regulator |
| EL087_RS03230 (NCTC11169_00652) | - | 662573..662932 (+) | 360 | WP_126406809.1 | YbaN family protein | - |
| EL087_RS03235 (NCTC11169_00653) | rnc | 663306..664004 (+) | 699 | WP_126406811.1 | ribonuclease III | - |
Sequence
Protein
Download Length: 450 a.a. Molecular weight: 51404.65 Da Isoelectric Point: 4.6951
>NTDB_id=1120259 EL087_RS03220 WP_126406807.1 660406..661758(+) (micB) [Streptococcus milleri strain NCTC11169]
MIDNIRQFVVSKDFVFVLLILGFILVITLLSLENRRDNVRIRQLNQKVKDLIAGDYSEVLDMQGGPEITDITNSINDLSE
VIRLTHENLEQETKRLSSILSYMTDGVLATNRRGQIIMINDMATKQLGVKESEARKMNILKLLDIEDEYDLRDLITKVPE
LTIDSQDENGEFLSLRVRFALIRRESGFISGLVAVLHDTTEQEKEERERRLFVSNVSHELRTPLTSVKSYLEALDEGALS
EPVAPDFIKVSLDETNRMMRMVSDLLSLSRIDNATSHLDIELTNFTAFITFILNRFDKIRSQNDDKKYEIIRDYPINSIW
VEIDTDKMTQVIDNIINNAIKYSPDGGKITVSMKTTETQMILSISDEGLGIPKKDLPKIFDRFYRVDKARSRAQGGSGLG
LAIAKEIIKQHHGFIWAKSEYGKGSTFTIVLPYDKEAVKDDDWEEDELEG
MIDNIRQFVVSKDFVFVLLILGFILVITLLSLENRRDNVRIRQLNQKVKDLIAGDYSEVLDMQGGPEITDITNSINDLSE
VIRLTHENLEQETKRLSSILSYMTDGVLATNRRGQIIMINDMATKQLGVKESEARKMNILKLLDIEDEYDLRDLITKVPE
LTIDSQDENGEFLSLRVRFALIRRESGFISGLVAVLHDTTEQEKEERERRLFVSNVSHELRTPLTSVKSYLEALDEGALS
EPVAPDFIKVSLDETNRMMRMVSDLLSLSRIDNATSHLDIELTNFTAFITFILNRFDKIRSQNDDKKYEIIRDYPINSIW
VEIDTDKMTQVIDNIINNAIKYSPDGGKITVSMKTTETQMILSISDEGLGIPKKDLPKIFDRFYRVDKARSRAQGGSGLG
LAIAKEIIKQHHGFIWAKSEYGKGSTFTIVLPYDKEAVKDDDWEEDELEG
Nucleotide
Download Length: 1353 bp
>NTDB_id=1120259 EL087_RS03220 WP_126406807.1 660406..661758(+) (micB) [Streptococcus milleri strain NCTC11169]
ATGATTGATAATATTAGACAATTTGTTGTATCAAAAGATTTTGTATTTGTCTTACTCATTTTAGGATTTATTTTGGTGAT
TACCTTGCTTTCCTTGGAAAACCGACGTGATAATGTTCGTATTCGCCAATTGAATCAAAAAGTGAAAGACTTAATTGCAG
GAGATTATTCAGAAGTTTTAGATATGCAAGGTGGCCCAGAAATTACGGATATTACTAATAGTATCAATGATTTATCTGAG
GTAATCCGTCTAACGCATGAAAATTTAGAGCAAGAAACTAAGCGCCTGTCGAGTATTTTATCCTATATGACGGACGGCGT
TCTTGCGACCAATCGTCGTGGGCAGATTATCATGATCAATGATATGGCGACCAAGCAGTTGGGAGTTAAAGAATCTGAAG
CACGAAAGATGAATATCTTAAAACTGCTGGATATCGAAGACGAATATGACTTACGAGACTTGATTACGAAAGTTCCAGAG
CTGACCATTGATTCGCAGGATGAAAATGGAGAGTTTTTAAGTTTACGTGTTCGATTTGCCTTGATTCGGCGAGAATCAGG
CTTTATTTCAGGGCTGGTTGCAGTGCTGCATGATACAACGGAGCAGGAAAAAGAGGAACGTGAGCGGAGACTATTTGTTT
CTAATGTCAGTCATGAATTGCGTACTCCCTTGACCAGTGTCAAGTCTTATCTGGAAGCATTAGATGAGGGCGCTTTGTCT
GAGCCAGTTGCACCAGATTTTATTAAGGTTTCGTTAGATGAAACCAATCGGATGATGCGAATGGTTTCAGACTTGCTGAG
TTTGTCACGTATTGACAATGCTACCAGTCATTTGGATATTGAGCTGACGAATTTTACAGCTTTTATCACGTTTATTTTAA
ATCGTTTTGACAAAATCAGAAGTCAGAATGATGATAAGAAGTACGAAATTATTCGAGATTATCCTATTAACTCTATTTGG
GTCGAAATTGATACAGATAAGATGACACAGGTGATTGATAATATTATCAACAATGCCATTAAATATTCTCCTGACGGTGG
TAAAATTACGGTCAGTATGAAAACAACCGAGACCCAAATGATTTTGTCTATATCAGATGAGGGCTTAGGGATTCCTAAAA
AAGATTTACCGAAAATTTTTGACCGCTTCTATCGTGTAGACAAAGCAAGAAGTCGTGCACAAGGTGGATCCGGATTAGGT
TTAGCTATTGCTAAGGAAATTATTAAGCAACATCACGGATTTATCTGGGCAAAGAGCGAGTATGGCAAAGGCTCAACGTT
TACAATCGTTCTGCCATATGACAAAGAAGCTGTCAAAGATGATGATTGGGAAGAAGATGAATTAGAAGGATAG
ATGATTGATAATATTAGACAATTTGTTGTATCAAAAGATTTTGTATTTGTCTTACTCATTTTAGGATTTATTTTGGTGAT
TACCTTGCTTTCCTTGGAAAACCGACGTGATAATGTTCGTATTCGCCAATTGAATCAAAAAGTGAAAGACTTAATTGCAG
GAGATTATTCAGAAGTTTTAGATATGCAAGGTGGCCCAGAAATTACGGATATTACTAATAGTATCAATGATTTATCTGAG
GTAATCCGTCTAACGCATGAAAATTTAGAGCAAGAAACTAAGCGCCTGTCGAGTATTTTATCCTATATGACGGACGGCGT
TCTTGCGACCAATCGTCGTGGGCAGATTATCATGATCAATGATATGGCGACCAAGCAGTTGGGAGTTAAAGAATCTGAAG
CACGAAAGATGAATATCTTAAAACTGCTGGATATCGAAGACGAATATGACTTACGAGACTTGATTACGAAAGTTCCAGAG
CTGACCATTGATTCGCAGGATGAAAATGGAGAGTTTTTAAGTTTACGTGTTCGATTTGCCTTGATTCGGCGAGAATCAGG
CTTTATTTCAGGGCTGGTTGCAGTGCTGCATGATACAACGGAGCAGGAAAAAGAGGAACGTGAGCGGAGACTATTTGTTT
CTAATGTCAGTCATGAATTGCGTACTCCCTTGACCAGTGTCAAGTCTTATCTGGAAGCATTAGATGAGGGCGCTTTGTCT
GAGCCAGTTGCACCAGATTTTATTAAGGTTTCGTTAGATGAAACCAATCGGATGATGCGAATGGTTTCAGACTTGCTGAG
TTTGTCACGTATTGACAATGCTACCAGTCATTTGGATATTGAGCTGACGAATTTTACAGCTTTTATCACGTTTATTTTAA
ATCGTTTTGACAAAATCAGAAGTCAGAATGATGATAAGAAGTACGAAATTATTCGAGATTATCCTATTAACTCTATTTGG
GTCGAAATTGATACAGATAAGATGACACAGGTGATTGATAATATTATCAACAATGCCATTAAATATTCTCCTGACGGTGG
TAAAATTACGGTCAGTATGAAAACAACCGAGACCCAAATGATTTTGTCTATATCAGATGAGGGCTTAGGGATTCCTAAAA
AAGATTTACCGAAAATTTTTGACCGCTTCTATCGTGTAGACAAAGCAAGAAGTCGTGCACAAGGTGGATCCGGATTAGGT
TTAGCTATTGCTAAGGAAATTATTAAGCAACATCACGGATTTATCTGGGCAAAGAGCGAGTATGGCAAAGGCTCAACGTT
TACAATCGTTCTGCCATATGACAAAGAAGCTGTCAAAGATGATGATTGGGAAGAAGATGAATTAGAAGGATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| micB | Streptococcus pneumoniae Cp1015 |
81.549 |
97.556 |
0.796 |
| vicK | Streptococcus mutans UA159 |
71.394 |
90.889 |
0.649 |