Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   EL087_RS03225 Genome accession   NZ_LR134288
Coordinates   661761..662564 (+) Length   267 a.a.
NCBI ID   WP_003027672.1    Uniprot ID   A0AAI9NI03
Organism   Streptococcus milleri strain NCTC11169     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 656761..667564
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL087_RS03205 (NCTC11169_00647) - 657747..659060 (+) 1314 WP_003039969.1 glycosyltransferase family 4 protein -
  EL087_RS03210 (NCTC11169_00648) - 659087..659428 (+) 342 WP_003040057.1 hypothetical protein -
  EL087_RS03215 (NCTC11169_00649) micA 659712..660413 (+) 702 WP_003040015.1 response regulator YycF Regulator
  EL087_RS03220 (NCTC11169_00650) micB 660406..661758 (+) 1353 WP_126406807.1 cell wall metabolism sensor histidine kinase VicK Regulator
  EL087_RS03225 (NCTC11169_00651) vicX 661761..662564 (+) 804 WP_003027672.1 MBL fold metallo-hydrolase Regulator
  EL087_RS03230 (NCTC11169_00652) - 662573..662932 (+) 360 WP_126406809.1 YbaN family protein -
  EL087_RS03235 (NCTC11169_00653) rnc 663306..664004 (+) 699 WP_126406811.1 ribonuclease III -
  EL087_RS03240 (NCTC11169_00654) smc 663995..667528 (+) 3534 WP_126406813.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29868.85 Da        Isoelectric Point: 6.0342

>NTDB_id=1120260 EL087_RS03225 WP_003027672.1 661761..662564(+) (vicX) [Streptococcus milleri strain NCTC11169]
MSEKGFKYSILASGSTGNCFYLETPKKKLLIDAGLSGKKITSLLSEIDRKPEDLDAILVTHEHKDHIHGVGVLARKYHLD
IYANQETWNAMEVALGKIDVSQKHIFEMGKTKTFGDIDIESFGVSHDAVAPQFYRLMKDDKSFVLLTDTGYVSDRMAGII
ENADGYLIESNHDIEILRSGAYPWSLKQRILSDQGHLSNDDGAETMIRTLGYRTKKIYLGHLSKENNTKELAHITMINQL
AQADLAVEHDFHICDTSPDTATPLTNI

Nucleotide


Download         Length: 804 bp        

>NTDB_id=1120260 EL087_RS03225 WP_003027672.1 661761..662564(+) (vicX) [Streptococcus milleri strain NCTC11169]
ATGAGCGAGAAAGGATTTAAGTATAGTATTTTAGCGTCAGGTTCTACCGGTAACTGTTTTTATTTAGAAACTCCAAAGAA
GAAGTTGTTGATTGATGCGGGCTTGTCTGGGAAGAAAATTACCAGCTTATTGAGTGAAATTGACCGTAAACCAGAGGATT
TGGATGCCATTTTGGTAACGCATGAGCATAAGGATCATATCCATGGTGTGGGCGTTTTGGCACGGAAATATCATTTAGAC
ATTTATGCCAATCAAGAAACATGGAATGCTATGGAAGTAGCGCTTGGGAAGATTGATGTTAGTCAGAAGCACATTTTTGA
AATGGGAAAAACCAAGACATTTGGCGATATTGACATTGAAAGTTTTGGTGTTAGTCATGATGCGGTTGCACCGCAATTTT
ACCGACTGATGAAAGACGATAAAAGTTTTGTTCTACTAACGGATACTGGCTATGTTAGCGATCGTATGGCGGGGATTATT
GAAAATGCGGACGGGTATTTGATCGAGTCCAACCATGATATTGAAATCCTTCGTAGCGGAGCTTATCCTTGGAGCCTGAA
GCAGCGGATTTTATCTGACCAAGGACATTTGTCGAATGATGACGGGGCAGAAACCATGATTCGTACGTTGGGTTATCGCA
CTAAGAAAATCTATCTAGGGCATCTTAGCAAAGAAAATAATACCAAAGAATTGGCTCATATCACAATGATCAATCAATTA
GCACAGGCTGATTTGGCGGTTGAGCATGATTTTCATATTTGTGATACATCGCCAGATACGGCGACACCTTTAACAAATAT
TTAG

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

81.648

100

0.816

Multiple sequence alignment