Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | LOA_RS05170 | Genome accession | NZ_CP004006 |
| Coordinates | 1053872..1054471 (+) | Length | 199 a.a. |
| NCBI ID | WP_025385433.1 | Uniprot ID | W0BA24 |
| Organism | Legionella oakridgensis ATCC 33761 = DSM 21215 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1048872..1059471
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOA_RS05155 (Loa_01151) | - | 1050870..1051811 (-) | 942 | WP_025385431.1 | hypothetical protein | - |
| LOA_RS05160 (Loa_01152) | pilM | 1052116..1053174 (+) | 1059 | WP_025385432.1 | type IV pilus assembly protein PilM | Machinery gene |
| LOA_RS05165 (Loa_01153) | - | 1053412..1053879 (+) | 468 | WP_238551333.1 | PilN domain-containing protein | - |
| LOA_RS05170 (Loa_01154) | pilO | 1053872..1054471 (+) | 600 | WP_025385433.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| LOA_RS05175 (Loa_01155) | - | 1054519..1055076 (+) | 558 | WP_025385434.1 | pilus assembly protein PilP | - |
| LOA_RS05180 (Loa_01156) | pilQ | 1055359..1057551 (+) | 2193 | WP_025385435.1 | type IV pilus secretin PilQ | Machinery gene |
| LOA_RS05185 | aroK | 1057758..1058284 (+) | 527 | Protein_1066 | shikimate kinase AroK | - |
| LOA_RS05190 (Loa_01159) | aroB | 1058271..1059379 (+) | 1109 | Protein_1067 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 199 a.a. Molecular weight: 22822.52 Da Isoelectric Point: 7.3963
>NTDB_id=111998 LOA_RS05170 WP_025385433.1 1053872..1054471(+) (pilO) [Legionella oakridgensis ATCC 33761 = DSM 21215]
MNNFSLNELTLENVGQWPKSVKIGVIAFLSILVVGMGYWLIIKSNFEQYEQLKEKEVSLKQEFELKQHQASNLQAYRNQM
QIMQERFGNMLKQLPTQNEMPGLLEDISKTGIASGLTFELFAPQPEVQHDFYIELPIKITVVGNYHQLAVFLSRVAAMSR
IVTLHDFMIEGAATDKQKSGTGDQLIMKMTAKIYRYRTL
MNNFSLNELTLENVGQWPKSVKIGVIAFLSILVVGMGYWLIIKSNFEQYEQLKEKEVSLKQEFELKQHQASNLQAYRNQM
QIMQERFGNMLKQLPTQNEMPGLLEDISKTGIASGLTFELFAPQPEVQHDFYIELPIKITVVGNYHQLAVFLSRVAAMSR
IVTLHDFMIEGAATDKQKSGTGDQLIMKMTAKIYRYRTL
Nucleotide
Download Length: 600 bp
>NTDB_id=111998 LOA_RS05170 WP_025385433.1 1053872..1054471(+) (pilO) [Legionella oakridgensis ATCC 33761 = DSM 21215]
ATGAATAATTTCAGTTTGAATGAACTGACGTTGGAGAATGTAGGGCAATGGCCAAAGAGCGTCAAAATAGGAGTCATTGC
TTTTTTATCCATTCTAGTCGTTGGGATGGGGTATTGGCTTATTATTAAGAGTAATTTTGAACAATATGAGCAATTAAAAG
AGAAAGAAGTCTCCTTGAAACAGGAATTTGAACTAAAACAGCATCAAGCTTCTAACCTGCAGGCTTATCGTAATCAAATG
CAAATCATGCAGGAACGTTTTGGTAATATGCTCAAGCAGTTACCGACCCAAAACGAGATGCCTGGTTTATTGGAAGACAT
TTCTAAAACTGGAATTGCAAGTGGTTTGACGTTTGAATTATTTGCTCCCCAGCCAGAAGTGCAGCATGATTTTTACATTG
AGTTGCCTATTAAAATCACAGTCGTAGGGAATTATCATCAATTGGCTGTTTTTTTAAGTCGGGTCGCCGCTATGAGCCGA
ATTGTAACTTTACACGATTTTATGATTGAAGGTGCCGCTACTGATAAGCAAAAAAGTGGCACAGGGGATCAATTAATCAT
GAAAATGACTGCCAAAATTTACCGGTATCGTACATTATGA
ATGAATAATTTCAGTTTGAATGAACTGACGTTGGAGAATGTAGGGCAATGGCCAAAGAGCGTCAAAATAGGAGTCATTGC
TTTTTTATCCATTCTAGTCGTTGGGATGGGGTATTGGCTTATTATTAAGAGTAATTTTGAACAATATGAGCAATTAAAAG
AGAAAGAAGTCTCCTTGAAACAGGAATTTGAACTAAAACAGCATCAAGCTTCTAACCTGCAGGCTTATCGTAATCAAATG
CAAATCATGCAGGAACGTTTTGGTAATATGCTCAAGCAGTTACCGACCCAAAACGAGATGCCTGGTTTATTGGAAGACAT
TTCTAAAACTGGAATTGCAAGTGGTTTGACGTTTGAATTATTTGCTCCCCAGCCAGAAGTGCAGCATGATTTTTACATTG
AGTTGCCTATTAAAATCACAGTCGTAGGGAATTATCATCAATTGGCTGTTTTTTTAAGTCGGGTCGCCGCTATGAGCCGA
ATTGTAACTTTACACGATTTTATGATTGAAGGTGCCGCTACTGATAAGCAAAAAAGTGGCACAGGGGATCAATTAATCAT
GAAAATGACTGCCAAAATTTACCGGTATCGTACATTATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Legionella pneumophila strain ERS1305867 |
70.202 |
99.497 |
0.698 |
| comO | Acinetobacter baylyi ADP1 |
41.361 |
95.98 |
0.397 |
| pilO | Acinetobacter baumannii D1279779 |
38.743 |
95.98 |
0.372 |