Detailed information NTG1119569

Bioinformatically predicted

Overview

• Name: comEC/celB
• Type: Machinery gene
• Locus tag: EL081_RS03485
• Genome accession: NZ_LR134266
• Coordinates: 632610..634850 (+)
• Length: 746 a.a.
• NCBI ID: WP_126403988.1
• Uniprot ID: -
• Organism: Streptococcus viridans strain NCTC3166
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 627610..639850

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL081_RS03465 (NCTC3166_00698)	-	627779..628525 (-)	747	WP_126403984.1	tRNA1(Val) (adenine(37)-N6)-methyltransferase	-
EL081_RS03470 (NCTC3166_00699)	-	628625..630964 (-)	2340	WP_126403985.1	cation-translocating P-type ATPase	-
EL081_RS03475 (NCTC3166_00700)	-	631102..631845 (+)	744	WP_126403986.1	1-acyl-sn-glycerol-3-phosphate acyltransferase	-
EL081_RS03480 (NCTC3166_00701)	comEA/celA/cilE	631949..632626 (+)	678	WP_126403987.1	helix-hairpin-helix domain-containing protein	Machinery gene
EL081_RS03485 (NCTC3166_00702)	comEC/celB	632610..634850 (+)	2241	WP_126403988.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
EL081_RS03490 (NCTC3166_00703)	-	634913..635578 (+)	666	WP_126403989.1	DUF805 domain-containing protein	-
EL081_RS03495 (NCTC3166_00704)	holA	635556..636593 (+)	1038	WP_126405032.1	DNA polymerase III subunit delta	-
EL081_RS03500 (NCTC3166_00705)	sodA	636665..637270 (+)	606	WP_126403990.1	superoxide dismutase SodA	-
EL081_RS03505 (NCTC3166_00706)	-	637523..638995 (+)	1473	WP_126403991.1	helicase HerA-like domain-containing protein	-

Sequence

Protein

• Length: 746 a.a.
• Molecular weight: 85962.85 Da
• Isoelectric Point: 9.5916

>NTDB_id=1119569 EL081_RS03485 WP_126403988.1 632610..634850(+) (comEC/celB) [Streptococcus viridans strain NCTC3166]
MLQWIRSLHIHLFHLTLPVLALYYWMYTGHWLALIFLLAFLILFRRRYGDKRFLCLIGFLSLFALCFAFRIEQGRRESSD
HRVPRVIQLLPDTIKVNGDALSFRAKSGDRTFQVFYQLQSEEEQAYFKHLDHGLELRIKGELETPTKQRNFMGFDYQAYL
KTQGIHHLLKISHILEKKVAEPSDVIGILSSWRRKALVWVHQHFPQPMSHYMTGLLFGFLDVEFEEMSQLYSNLGIIHLF
ALSGMQVAFFLDAFRRFFLRLGLEQEKVAILLYPFSLLYAGMTGFSVSVVRSLLQKLLAQAGLKGMENMGVTLLLLIVLL
PSSVLTAGGLLSCAYAFILTLTSSEEEKSGIQKVVKESLVLTLGVLPFLIFFFGEYQPWSLPLTFIFSLLFDLLLLPGLS
VVFLLSFFYPLTFWNPFFVWMEKSMEYLARFTSKSLVFGQPSIYFFILLLCLLACLYEMRKVKKWRYLFLLLICSIFALV
KHPLENEITIIDIGQGDSILLRDWRGKTILIDTGGKVDFGQKEGWKKRRSTSNAERTLIPYLKSRGIDRIDHMILTHTDT
DHMGDLEVLAAKVSIQEINISKGSLKKGTFVRLLKRLNLPVKTLEAGDQLTIFDGSAEVLYPVEVGDGSNNDSLVLYGRF
YGWTFLFTGDLEEEGEKTLLARYPQLRVDVLKAGHHGSKGSSHPAFLKQIQAKIALISAGEKNRYQHPHRETLERFKELQ
MTVFRTDQQGAIRFRGWNQWKIETVR

Nucleotide

• Length: 2241 bp

>NTDB_id=1119569 EL081_RS03485 WP_126403988.1 632610..634850(+) (comEC/celB) [Streptococcus viridans strain NCTC3166]
ATGTTACAGTGGATTAGAAGTCTCCATATTCATTTATTTCATCTCACCCTGCCAGTCTTAGCTCTCTATTATTGGATGTA
CACGGGACACTGGCTCGCTCTAATCTTCCTTCTGGCTTTCCTCATCTTGTTTAGGAGACGCTACGGGGACAAACGATTTT
TGTGCCTCATAGGGTTTCTTTCCCTCTTTGCCCTTTGTTTTGCTTTCCGGATCGAACAAGGAAGACGAGAGTCAAGCGAT
CATAGGGTCCCAAGGGTTATTCAGCTTTTACCGGATACCATCAAGGTGAATGGAGATGCTTTATCTTTTCGTGCGAAGTC
GGGTGACCGTACTTTTCAGGTTTTCTACCAGCTTCAGTCAGAAGAAGAACAAGCTTATTTTAAACACCTGGATCATGGGC
TAGAATTACGGATCAAAGGGGAATTAGAAACACCGACCAAACAGCGTAATTTTATGGGCTTTGATTACCAGGCTTATCTG
AAGACACAAGGGATCCATCATCTTTTGAAAATTAGCCACATCCTTGAAAAGAAAGTAGCTGAGCCTAGCGATGTGATAGG
AATTCTTTCTAGTTGGAGGCGGAAGGCCCTTGTATGGGTCCATCAGCATTTCCCCCAGCCCATGAGTCACTATATGACGG
GCTTGCTTTTTGGTTTTTTAGATGTCGAGTTTGAGGAAATGAGCCAGCTGTATTCGAACTTGGGAATTATCCATCTGTTT
GCCTTGTCAGGCATGCAGGTTGCCTTTTTCTTAGATGCCTTTCGACGATTCTTTCTCCGCCTGGGATTGGAACAGGAGAA
GGTTGCAATCCTCCTCTATCCGTTTTCCCTTCTTTATGCTGGGATGACGGGGTTTTCGGTTTCGGTCGTTCGAAGCCTCT
TACAGAAACTCCTGGCCCAGGCTGGGCTCAAAGGAATGGAAAATATGGGTGTCACCCTTCTTTTATTGATTGTTCTCCTA
CCTTCCTCCGTATTAACTGCTGGAGGTCTCTTATCCTGCGCCTATGCCTTTATATTGACGCTCACCTCTTCCGAAGAGGA
GAAGTCGGGAATCCAAAAAGTCGTCAAGGAAAGTCTGGTGTTAACACTAGGAGTTCTTCCTTTTTTGATATTTTTCTTTG
GAGAATACCAACCCTGGTCTCTTCCTCTAACCTTTATTTTTTCTCTCTTATTTGACCTTCTGTTGTTACCAGGTCTGAGT
GTCGTCTTTCTCCTCTCCTTTTTCTATCCCTTGACCTTCTGGAATCCTTTCTTCGTCTGGATGGAAAAAAGTATGGAGTA
TCTAGCGAGATTCACTAGCAAATCCTTGGTTTTTGGACAGCCAAGCATTTATTTTTTCATCTTGCTTTTGTGCTTGCTAG
CTTGCCTTTATGAGATGCGAAAGGTTAAGAAGTGGAGATATCTTTTTCTACTCTTAATATGCTCTATATTCGCCCTTGTG
AAGCATCCTTTAGAAAATGAGATTACCATCATTGATATTGGTCAAGGAGATAGTATTTTGCTACGTGATTGGCGAGGGAA
AACCATCCTAATTGATACAGGAGGAAAAGTGGACTTTGGCCAAAAGGAGGGATGGAAGAAGCGGAGGTCTACTAGCAATG
CAGAACGGACCTTGATTCCCTATCTCAAGAGTAGGGGGATTGACCGGATTGACCATATGATTCTCACGCATACTGACACA
GATCACATGGGAGATTTGGAAGTACTTGCGGCTAAGGTTAGCATTCAGGAAATCAACATTTCCAAGGGAAGCTTAAAAAA
AGGTACTTTTGTCCGTTTGCTCAAACGCTTAAACCTACCAGTAAAAACGCTGGAGGCTGGTGATCAACTGACGATCTTTG
ATGGGAGTGCAGAAGTTCTCTATCCGGTAGAGGTAGGAGATGGGAGTAATAACGATTCCCTTGTCCTCTATGGGAGGTTT
TATGGTTGGACCTTCCTTTTTACAGGAGATTTAGAAGAAGAGGGGGAAAAGACCTTGTTAGCCCGCTATCCTCAACTGCG
CGTGGATGTATTAAAAGCAGGACACCATGGTTCTAAGGGCTCTTCTCACCCAGCCTTCTTAAAGCAAATCCAAGCAAAAA
TTGCCTTGATATCTGCGGGAGAAAAAAATCGTTACCAGCATCCTCACCGGGAAACCTTGGAACGTTTTAAAGAGTTGCAG
ATGACTGTTTTTCGTACAGATCAGCAAGGAGCGATTCGTTTTAGAGGTTGGAATCAGTGGAAGATTGAAACCGTTCGATA
A

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (32-172)

• Competence protein (Competence) (215-458)

• Metallo-beta-lactamase superfamily (Lactamase_B) (494-700)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC/celB	Streptococcus mitis NCTC 12261	52.996	100	0.534
comEC/celB	Streptococcus mitis SK321	52.855	100	0.534
comEC/celB	Streptococcus pneumoniae TIGR4	52.527	100	0.529
comEC/celB	Streptococcus pneumoniae Rx1	52.261	100	0.527
comEC/celB	Streptococcus pneumoniae D39	52.261	100	0.527
comEC/celB	Streptococcus pneumoniae R6	52.261	100	0.527
comEC	Lactococcus lactis subsp. cremoris KW2	44.758	99.732	0.446