Detailed information    

insolico Bioinformatically predicted

Overview


Name   amiE   Type   Regulator
Locus tag   ELZ51_RS01865 Genome accession   NZ_LR134094
Coordinates   342948..344018 (+) Length   356 a.a.
NCBI ID   WP_003057822.1    Uniprot ID   A0AAE9U680
Organism   Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context


Location: 337948..349018
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ELZ51_RS01850 (NCTC4669_00393) amiA 338475..340445 (+) 1971 WP_126425839.1 peptide ABC transporter substrate-binding protein Regulator
  ELZ51_RS01855 (NCTC4669_00394) amiC 340511..342013 (+) 1503 WP_126425841.1 ABC transporter permease Regulator
  ELZ51_RS01860 (NCTC4669_00395) amiD 342013..342939 (+) 927 WP_126425843.1 oligopeptide ABC transporter permease OppC Regulator
  ELZ51_RS01865 (NCTC4669_00396) amiE 342948..344018 (+) 1071 WP_003057822.1 ABC transporter ATP-binding protein Regulator
  ELZ51_RS01870 (NCTC4669_00397) amiF 344011..344934 (+) 924 WP_003057816.1 ABC transporter ATP-binding protein Regulator

Sequence


Protein


Download         Length: 356 a.a.        Molecular weight: 39607.62 Da        Isoelectric Point: 5.6648

>NTDB_id=1118264 ELZ51_RS01865 WP_003057822.1 342948..344018(+) (amiE) [Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669]
MTKENNVILTAKDVVVEFDVRDRVLTAIRNVSLELIEGEVLAFVGESGSGKSVLTKTFTGMLESNGRIANGSIVYRGQEL
TELKTNKEWAKIRGSKIATIFQDPMTSLSPIKTIGSQITEVIIKHQKVSHSKAKELALDYMNKVGIPNATKRFDDYPFEY
SGGMRQRIVIAIALACRPDILICDEPTTALDVTIQAQIIELLKSLQKEYHFTIIFITHDLGVVASIADKVAVMYAGEIVE
FGTVEEIFYDPRHPYTWSLLSSLPQLANESGELYSIPGTPPSLYSPIVGDAFALRSEYAMVLDFEETPPAISVSDTHWAK
TWLLHPEAPKVQKPAVIQDLHQKILKKMSRQEEGNV

Nucleotide


Download         Length: 1071 bp        

>NTDB_id=1118264 ELZ51_RS01865 WP_003057822.1 342948..344018(+) (amiE) [Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669]
ATGACAAAAGAAAATAATGTAATCTTAACTGCCAAAGATGTGGTGGTGGAATTCGATGTGCGCGACCGTGTTTTAACGGC
TATTCGGAACGTTTCTTTAGAGCTTATTGAAGGAGAAGTCCTTGCTTTTGTAGGAGAATCAGGTTCAGGTAAATCTGTTT
TAACCAAGACCTTTACAGGGATGTTGGAGTCTAATGGACGTATTGCTAACGGCTCAATTGTCTACCGTGGTCAAGAATTA
ACAGAACTAAAAACGAATAAGGAATGGGCTAAGATTCGTGGCTCAAAAATTGCTACTATTTTCCAAGACCCGATGACCAG
TCTTAGTCCTATCAAAACCATTGGTAGCCAGATCACAGAGGTCATTATCAAACATCAAAAAGTTAGCCATTCTAAAGCCA
AAGAATTGGCGCTTGATTATATGAATAAAGTTGGTATTCCAAATGCGACAAAGCGTTTTGACGACTATCCATTTGAATAT
TCAGGTGGTATGCGCCAACGTATTGTTATTGCCATTGCGTTAGCTTGTCGCCCAGATATCCTGATTTGTGATGAGCCCAC
AACAGCTCTCGACGTTACAATACAAGCCCAAATTATTGAATTGTTGAAATCACTTCAAAAAGAGTACCATTTTACGATTA
TTTTTATCACTCATGATTTAGGTGTTGTGGCAAGTATTGCTGACAAGGTTGCTGTCATGTATGCTGGTGAAATTGTCGAG
TTTGGAACTGTTGAAGAAATTTTCTATGATCCACGTCATCCTTACACATGGAGTTTATTGTCAAGCTTACCGCAATTAGC
CAATGAGTCAGGAGAACTTTACTCAATTCCAGGGACACCACCGTCACTTTATTCGCCAATCGTTGGCGATGCATTTGCGC
TTCGCTCAGAATATGCTATGGTTTTGGATTTCGAAGAGACACCACCTGCTATTAGTGTATCTGATACTCATTGGGCAAAA
ACATGGCTTTTGCACCCAGAGGCGCCAAAAGTTCAGAAACCGGCAGTTATTCAAGATCTACATCAAAAAATCTTGAAAAA
AATGTCACGACAGGAGGAAGGAAATGTCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

77.5

100

0.784

  amiE Streptococcus thermophilus LMG 18311

76.389

100

0.772

  amiE Streptococcus thermophilus LMD-9

76.389

100

0.772

  oppD Streptococcus mutans UA159

57.27

94.663

0.542


Multiple sequence alignment