Detailed information NTG1118265

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: ELZ51_RS01870
• Genome accession: NZ_LR134094
• Coordinates: 344011..344934 (+)
• Length: 307 a.a.
• NCBI ID: WP_003057816.1
• Uniprot ID: A0A9X8T611
• Organism: Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 339011..349934

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ELZ51_RS01855 (NCTC4669_00394)	amiC	340511..342013 (+)	1503	WP_126425841.1	ABC transporter permease	Regulator
ELZ51_RS01860 (NCTC4669_00395)	amiD	342013..342939 (+)	927	WP_126425843.1	oligopeptide ABC transporter permease OppC	Regulator
ELZ51_RS01865 (NCTC4669_00396)	amiE	342948..344018 (+)	1071	WP_003057822.1	ABC transporter ATP-binding protein	Regulator
ELZ51_RS01870 (NCTC4669_00397)	amiF	344011..344934 (+)	924	WP_003057816.1	ABC transporter ATP-binding protein	Regulator

Sequence

Protein

• Length: 307 a.a.
• Molecular weight: 34796.93 Da
• Isoelectric Point: 6.4058

>NTDB_id=1118265 ELZ51_RS01870 WP_003057816.1 344011..344934(+) (amiF) [Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669]
MSEKLVEVKDLEISFGEGKKKFVAVKNANFFIKKGETFSLVGESGSGKTTIGRAIIGLNDTSSGDILYDGKVINRRKSKS
ESNELIRKIQMIFQDPAASLNERATVDYIISEGLYNFNLFKTEEERKEKIKNMMAEVGLLSEHLTRYPHEFSGGQRQRIG
IARALVMNPEFVIADEPISALDVSVRAQVLNLLKRMQAEKGLTYLFIAHDLSVVRFISDRIAVIHKGVIVEVAETEELFN
NPIHPYTKSLLSAVPIPDPILERQKELIVYNPEQHDYTEDKPTMVEIKPNHFVWANQAEVEKYKAEQ

Nucleotide

• Length: 924 bp

>NTDB_id=1118265 ELZ51_RS01870 WP_003057816.1 344011..344934(+) (amiF) [Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669]
ATGTCTGAGAAATTAGTCGAAGTTAAAGACCTAGAAATTTCCTTCGGAGAGGGAAAGAAAAAATTTGTTGCGGTTAAAAA
TGCCAATTTCTTTATCAAAAAAGGTGAAACTTTCTCTTTAGTTGGAGAATCTGGAAGCGGTAAAACAACAATTGGTCGTG
CTATTATTGGTTTGAATGATACCAGTTCTGGTGACATCCTTTATGATGGAAAAGTTATCAATCGAAGAAAGTCAAAATCA
GAATCAAATGAGCTCATTCGTAAGATTCAAATGATTTTCCAAGACCCTGCAGCTAGTCTGAATGAACGTGCAACTGTTGA
CTATATCATTTCAGAAGGTCTTTATAATTTTAATCTGTTCAAAACAGAAGAAGAACGTAAAGAAAAAATTAAGAACATGA
TGGCCGAAGTTGGTTTGTTATCAGAACATTTGACCCGCTATCCTCACGAATTTTCAGGAGGCCAACGTCAGCGGATTGGT
ATCGCGAGAGCCCTGGTGATGAATCCCGAATTTGTCATTGCTGATGAACCTATATCCGCTCTAGATGTTTCTGTTCGAGC
ACAGGTCTTGAATCTTCTTAAAAGAATGCAAGCAGAAAAAGGACTCACTTACCTTTTCATTGCCCACGACCTATCAGTTG
TTCGCTTCATTTCAGATCGTATTGCGGTTATCCATAAAGGAGTTATTGTGGAGGTTGCCGAAACAGAAGAATTATTTAAT
AATCCCATCCACCCTTACACAAAATCTCTTTTATCAGCTGTTCCTATTCCAGATCCAATATTGGAACGTCAAAAAGAGCT
CATTGTCTATAATCCAGAGCAACATGACTATACAGAAGATAAACCAACGATGGTTGAAATTAAGCCAAATCACTTTGTGT
GGGCTAACCAAGCAGAAGTTGAAAAGTATAAAGCAGAACAATAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (230-262)

• ABC transporter (ABC_tran) (25-178)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMG 18311	81.759	100	0.818
amiF	Streptococcus thermophilus LMD-9	81.433	100	0.814
amiF	Streptococcus salivarius strain HSISS4	81.433	100	0.814