Detailed information    

insolico Bioinformatically predicted

Overview


Name   comEC/celB   Type   Machinery gene
Locus tag   ELZ47_RS08185 Genome accession   NZ_LR134002
Coordinates   1651414..1653654 (-) Length   746 a.a.
NCBI ID   WP_126435769.1    Uniprot ID   A0AAJ5TAU9
Organism   Streptococcus sanguinis strain NCTC 10904     
Function   ssDNA transport into the cell (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1646414..1658654
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ELZ47_RS08160 (NCTC10904_01602) - 1646619..1646759 (-) 141 WP_002897970.1 hypothetical protein -
  ELZ47_RS08165 (NCTC10904_01603) - 1646970..1648049 (-) 1080 WP_331852790.1 serine hydrolase -
  ELZ47_RS08170 (NCTC10904_01604) sodA 1648185..1648790 (-) 606 WP_002906995.1 superoxide dismutase SodA -
  ELZ47_RS08175 (NCTC10904_01605) holA 1648853..1649899 (-) 1047 WP_126435767.1 DNA polymerase III subunit delta -
  ELZ47_RS08180 (NCTC10904_01606) - 1650150..1651289 (-) 1140 WP_126435768.1 DUF805 domain-containing protein -
  ELZ47_RS08185 (NCTC10904_01607) comEC/celB 1651414..1653654 (-) 2241 WP_126435769.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  ELZ47_RS08190 (NCTC10904_01608) comEA 1653638..1654318 (-) 681 WP_126435770.1 helix-hairpin-helix domain-containing protein Machinery gene
  ELZ47_RS08195 (NCTC10904_01609) - 1654467..1655015 (-) 549 WP_164549596.1 HXXEE domain-containing protein -
  ELZ47_RS08200 (NCTC10904_01610) - 1655088..1655828 (-) 741 WP_002900842.1 lysophospholipid acyltransferase family protein -
  ELZ47_RS08205 (NCTC10904_01611) - 1655986..1658325 (+) 2340 WP_126435772.1 cation-translocating P-type ATPase -

Sequence


Protein


Download         Length: 746 a.a.        Molecular weight: 85161.35 Da        Isoelectric Point: 9.3790

>NTDB_id=1117826 ELZ47_RS08185 WP_126435769.1 1651414..1653654(-) (comEC/celB) [Streptococcus sanguinis strain NCTC 10904]
MSQWIKKLPLAPIYLAFILVWAYFAVYAGSSLAYFGLGVLLLRLFFSYPLKKSLAALAFLSLFVLFFLLRREIAEQAFRQ
EPPSASSVQVLPDTIKVNGDSLSFRGRTDGRLYQVFYKIKSASEKKAFQQLTDLVVLDMEAEFEQAQQQRNFSGFDYQAY
LKSQGIYRTLKINKIQSLRPISSLNPLDWLSVWRRKALVYIRSNFPSPMSHYMTGLLFGDLDTEFAEMSNLYSSLGIIHL
FALSGMQVGFFLDGFRRILLRLGMKRETVNALQLPFSFIYAGLTGFSVSVVRSLVQKLLAQQGLTRLDNFALTLMVLFII
MPNFLLTAGGVLSCAYAFLISMMDFEKLPPIRKLLAESLTISLGILPILIYYFSEFQPWSVILTFLFSLFFDLLMLPGLT
LIFILSPLVKISQANFFFELLEDVIRWVADFTPRPLIFGKPNLWLLFALLLVLALIYDFRRKKSWLLSFSLLTLLLFFLT
RHPLQNEITVVDIGQGDSIFLRDWRGRTVLIDVGGRVEIGKKEAWQERQTSSNAEKTLIPYLKSRGVASLDVLVLTHTDT
DHMGDMLEVAKHFSIKEIYVSKGSLTQLDFVQKLEQIETSVHVVEVGDEIPVFDSVLQVLYPSGTGDGGNDDSIVLYGEF
FQTKFLFTGDLERRGETELLQRFPQLKADVLKAGHHGSKGSSSPEFLEQIQPKLALISAGQNNRYRHPHQETLERFEKFN
TAIYRTDQQGAIRFTGWNSWRIETVR

Nucleotide


Download         Length: 2241 bp        

>NTDB_id=1117826 ELZ47_RS08185 WP_126435769.1 1651414..1653654(-) (comEC/celB) [Streptococcus sanguinis strain NCTC 10904]
ATGTCACAGTGGATTAAAAAGTTACCCCTCGCACCTATCTATCTGGCTTTCATCCTTGTCTGGGCCTATTTTGCCGTCTA
TGCTGGCAGTTCCTTGGCCTATTTTGGGCTGGGTGTCCTTTTGCTTCGTCTCTTTTTCAGCTATCCTCTCAAAAAAAGTC
TAGCTGCCTTGGCATTTCTGTCCCTTTTTGTCCTCTTTTTCTTACTTCGTCGGGAAATAGCAGAGCAGGCATTTAGGCAG
GAACCTCCTTCAGCTAGCTCGGTTCAGGTCTTGCCAGATACAATCAAAGTCAATGGAGACTCCCTATCCTTTCGAGGGCG
AACGGACGGTCGACTTTATCAGGTCTTCTACAAAATCAAATCAGCCAGTGAAAAGAAAGCTTTTCAGCAACTGACAGATT
TGGTCGTCCTTGATATGGAAGCAGAGTTTGAACAGGCCCAGCAGCAACGAAATTTTTCGGGCTTTGACTATCAGGCTTAT
TTAAAGAGTCAGGGGATTTACCGTACCTTAAAAATCAATAAGATTCAGTCACTAAGACCAATTTCCAGCTTAAATCCACT
GGATTGGCTGTCTGTTTGGCGGAGAAAAGCGCTGGTCTATATTCGAAGTAATTTTCCCAGCCCGATGAGTCATTATATGA
CTGGACTCTTGTTTGGTGACTTGGATACGGAGTTTGCGGAAATGAGCAATCTGTATTCTAGCTTGGGTATCATCCACTTG
TTTGCCTTGTCTGGTATGCAGGTAGGTTTCTTTTTGGATGGTTTTCGCAGGATTCTTCTACGTTTGGGGATGAAGAGGGA
GACAGTAAACGCCTTGCAGCTACCTTTTTCATTTATCTACGCTGGACTGACAGGCTTTTCTGTTTCTGTCGTCAGAAGCT
TAGTTCAGAAGTTGTTGGCCCAGCAAGGACTGACCAGATTAGATAACTTTGCTCTGACACTGATGGTTCTCTTTATCATC
ATGCCCAATTTTCTTCTGACAGCAGGCGGTGTCTTGTCCTGCGCCTATGCCTTTTTGATTTCTATGATGGATTTTGAAAA
GTTACCGCCGATTCGTAAGCTTTTAGCGGAAAGTCTGACTATTTCATTGGGGATTTTGCCTATACTAATCTACTATTTTT
CTGAATTTCAGCCTTGGTCTGTGATTTTAACTTTTCTATTTTCACTATTCTTTGACCTGCTGATGCTACCGGGGTTAACC
CTCATTTTTATTTTGTCACCACTTGTAAAAATTTCTCAGGCCAATTTTTTCTTTGAGTTACTCGAAGATGTGATTCGTTG
GGTAGCTGATTTTACTCCGCGTCCTTTGATTTTTGGGAAGCCCAACCTCTGGTTACTGTTTGCTCTGCTTTTGGTTTTGG
CTTTAATCTATGACTTTCGGAGAAAGAAAAGCTGGCTTTTATCTTTTAGTTTGCTTACTCTTCTCTTATTTTTTCTAACA
AGGCATCCGCTGCAAAACGAGATCACAGTAGTGGATATTGGTCAGGGAGATAGCATTTTTCTCAGGGACTGGCGAGGCAG
GACGGTTTTGATTGATGTAGGAGGACGAGTCGAGATAGGAAAGAAAGAGGCTTGGCAGGAGCGACAGACTTCATCCAATG
CAGAAAAGACCTTAATTCCCTATCTCAAAAGTCGTGGCGTTGCTAGTCTGGATGTATTGGTCCTGACTCATACCGATACC
GATCACATGGGAGATATGCTGGAGGTAGCTAAGCATTTTTCCATCAAGGAAATCTATGTTTCTAAAGGAAGTCTGACTCA
GCTTGATTTTGTTCAAAAACTGGAGCAGATAGAAACTTCTGTCCATGTCGTAGAAGTAGGAGATGAGATTCCGGTGTTTG
ACTCAGTTTTGCAGGTTCTCTATCCCAGCGGGACAGGCGATGGTGGAAATGATGATTCGATTGTACTCTACGGGGAGTTC
TTTCAGACAAAATTTTTGTTTACAGGTGATTTGGAAAGGCGAGGAGAAACTGAACTGCTGCAGCGATTTCCTCAGCTGAA
AGCAGATGTCTTAAAAGCAGGTCACCATGGATCCAAAGGCTCTTCCAGTCCAGAGTTTTTAGAGCAAATTCAGCCGAAAC
TGGCCTTGATATCAGCTGGACAGAATAATCGTTATCGTCATCCCCATCAGGAAACCTTGGAAAGATTTGAGAAGTTTAAT
ACAGCCATCTATCGAACTGACCAGCAGGGGGCCATTCGGTTTACTGGTTGGAATTCCTGGAGGATTGAAACGGTTCGTTG
A


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEC/celB Streptococcus mitis SK321

57.564

100

0.576

  comEC/celB Streptococcus mitis NCTC 12261

57.105

100

0.571

  comEC/celB Streptococcus pneumoniae TIGR4

56.627

100

0.567

  comEC/celB Streptococcus pneumoniae Rx1

56.359

100

0.564

  comEC/celB Streptococcus pneumoniae D39

56.359

100

0.564

  comEC/celB Streptococcus pneumoniae R6

56.359

100

0.564

  comEC Lactococcus lactis subsp. cremoris KW2

48.262

100

0.484


Multiple sequence alignment