Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | K2J56_RS14085 | Genome accession | NZ_JAIEUF010000001 |
| Coordinates | 2938704..2939234 (+) | Length | 176 a.a. |
| NCBI ID | WP_006177466.1 | Uniprot ID | A0AAE4E8Q4 |
| Organism | Enterobacter hormaechei strain ECC45 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2933704..2944234
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K2J56_RS14065 (K2J56_14065) | aphA | 2934028..2934741 (+) | 714 | WP_017382626.1 | acid phosphatase AphA | - |
| K2J56_RS14070 (K2J56_14070) | - | 2934854..2935270 (+) | 417 | WP_017382627.1 | secondary thiamine-phosphate synthase enzyme YjbQ | - |
| K2J56_RS14075 (K2J56_14075) | - | 2935273..2935626 (+) | 354 | WP_032646878.1 | MmcQ/YjbR family DNA-binding protein | - |
| K2J56_RS14080 (K2J56_14080) | uvrA | 2935630..2938452 (-) | 2823 | WP_003860287.1 | excinuclease ABC subunit UvrA | - |
| K2J56_RS14085 (K2J56_14085) | ssb | 2938704..2939234 (+) | 531 | WP_006177466.1 | single-stranded DNA-binding protein SSB1 | Machinery gene |
| K2J56_RS14090 (K2J56_14090) | - | 2939393..2940640 (+) | 1248 | WP_047058417.1 | site-specific integrase | - |
| K2J56_RS14095 (K2J56_14095) | - | 2940627..2942165 (+) | 1539 | WP_048984036.1 | site-specific integrase | - |
| K2J56_RS14100 (K2J56_14100) | - | 2942182..2944215 (+) | 2034 | WP_032646881.1 | integrase | - |
Sequence
Protein
Download Length: 176 a.a. Molecular weight: 18835.84 Da Isoelectric Point: 5.2456
>NTDB_id=1112928 K2J56_RS14085 WP_006177466.1 2938704..2939234(+) (ssb) [Enterobacter hormaechei strain ECC45]
MASRGVNKVILVGNLGQDPEVRYMPSGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVAGEYLRKGSQVYI
EGQLRTRKWTDQSGAEKYTTEVVVNVGGTMQMLGGRQGGGAPAGGGQNQQQGGWGQPQQPQGGNQFSGGAQSRPQQQSAP
APSNEPPMDFDDDIPF
MASRGVNKVILVGNLGQDPEVRYMPSGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVAGEYLRKGSQVYI
EGQLRTRKWTDQSGAEKYTTEVVVNVGGTMQMLGGRQGGGAPAGGGQNQQQGGWGQPQQPQGGNQFSGGAQSRPQQQSAP
APSNEPPMDFDDDIPF
Nucleotide
Download Length: 531 bp
>NTDB_id=1112928 K2J56_RS14085 WP_006177466.1 2938704..2939234(+) (ssb) [Enterobacter hormaechei strain ECC45]
ATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTCGGTAATCTGGGCCAGGACCCGGAAGTACGCTACATGCCGAGTGG
TGGCGCAGTTGCCAACATTACGCTGGCTACTTCCGAATCCTGGCGTGATAAAGCGACCGGAGAAATGAAAGAGCAGACCG
AATGGCACCGCGTTGTGCTGTTTGGCAAACTGGCCGAAGTGGCCGGTGAGTATCTGCGTAAAGGTTCTCAGGTCTATATC
GAAGGCCAGCTGCGTACCCGCAAATGGACCGACCAATCCGGCGCTGAGAAGTACACCACGGAAGTGGTGGTGAATGTGGG
CGGCACCATGCAAATGCTGGGTGGCCGTCAGGGCGGTGGCGCACCGGCAGGTGGCGGTCAGAATCAGCAGCAGGGTGGTT
GGGGTCAGCCTCAGCAGCCTCAGGGCGGCAACCAGTTCAGCGGCGGCGCGCAGTCCCGTCCGCAGCAGCAGTCTGCTCCG
GCACCGTCTAACGAACCGCCAATGGATTTCGACGACGATATCCCGTTCTAG
ATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTCGGTAATCTGGGCCAGGACCCGGAAGTACGCTACATGCCGAGTGG
TGGCGCAGTTGCCAACATTACGCTGGCTACTTCCGAATCCTGGCGTGATAAAGCGACCGGAGAAATGAAAGAGCAGACCG
AATGGCACCGCGTTGTGCTGTTTGGCAAACTGGCCGAAGTGGCCGGTGAGTATCTGCGTAAAGGTTCTCAGGTCTATATC
GAAGGCCAGCTGCGTACCCGCAAATGGACCGACCAATCCGGCGCTGAGAAGTACACCACGGAAGTGGTGGTGAATGTGGG
CGGCACCATGCAAATGCTGGGTGGCCGTCAGGGCGGTGGCGCACCGGCAGGTGGCGGTCAGAATCAGCAGCAGGGTGGTT
GGGGTCAGCCTCAGCAGCCTCAGGGCGGCAACCAGTTCAGCGGCGGCGCGCAGTCCCGTCCGCAGCAGCAGTCTGCTCCG
GCACCGTCTAACGAACCGCCAATGGATTTCGACGACGATATCCCGTTCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
76.667 |
100 |
0.784 |
| ssb | Glaesserella parasuis strain SC1401 |
56.216 |
100 |
0.591 |
| ssb | Neisseria meningitidis MC58 |
46.629 |
100 |
0.472 |
| ssb | Neisseria gonorrhoeae MS11 |
46.629 |
100 |
0.472 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
35.556 |
100 |
0.364 |