Detailed information NTG1111737

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: HMPREF9425_RS02785
• Genome accession: NZ_GL831112
• Coordinates: 526208..527134 (+)
• Length: 308 a.a.
• NCBI ID: WP_003094850.1
• Uniprot ID: -
• Organism: Streptococcus vestibularis ATCC 49124
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 521208..532134

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HMPREF9425_RS02770 (HMPREF9425_0577)	pta	521468..522451 (+)	984	WP_003096587.1	phosphate acetyltransferase	-
HMPREF9425_RS02775 (HMPREF9425_0578)	amiA	522684..524654 (+)	1971	WP_003096589.1	peptide ABC transporter substrate-binding protein	Regulator
HMPREF9425_RS02780 (HMPREF9425_0579)	amiC	524715..526208 (+)	1494	WP_003096591.1	ABC transporter permease	Regulator
HMPREF9425_RS02785 (HMPREF9425_0580)	amiD	526208..527134 (+)	927	WP_003094850.1	oligopeptide ABC transporter permease OppC	Regulator
HMPREF9425_RS02790 (HMPREF9425_0581)	amiE	527144..528229 (+)	1086	WP_003096593.1	ABC transporter ATP-binding protein	Regulator
HMPREF9425_RS02795 (HMPREF9425_0582)	amiF	528222..529151 (+)	930	WP_003096596.1	ATP-binding cassette domain-containing protein	Regulator
HMPREF9425_RS02800 (HMPREF9425_0583)	-	529202..529987 (-)	786	WP_037621376.1	hypothetical protein	-
HMPREF9425_RS02805 (HMPREF9425_0584)	-	529999..530697 (-)	699	WP_003096604.1	ABC transporter ATP-binding protein	-
HMPREF9425_RS02810 (HMPREF9425_0585)	-	530702..531079 (-)	378	WP_003096605.1	GntR family transcriptional regulator	-
HMPREF9425_RS02815 (HMPREF9425_0586)	-	531261..532055 (+)	795	WP_003096606.1	Cof-type HAD-IIB family hydrolase	-

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34681.81 Da
• Isoelectric Point: 9.5814

>NTDB_id=1111737 HMPREF9425_RS02785 WP_003094850.1 526208..527134(+) (amiD) [Streptococcus vestibularis ATCC 49124]
MASIDKSKFQFVKRDDFASETIDAPAYSYWKSVMRQFFKKKSTVVMLGILIAIVLMSFIYPMFSKFDFNDVSKVNDFSLR
YVHPNAQYWFGTDSNGKSLFDSVWFGARNSILIAVIATFLNVIIGLIVGAVWGISKTFDMIMMEIYNIISNIPDLLVVIV
LTYSLGSGFWNMIFAMTVTGWIGIAYTIRIQIMRYRDLEYNLASRTLGTPTAKIVVKNIMPQLVSVIVTMASQLLPGFIS
YEAFLSYFGLGLPVTTPSLGRLISDYAQNVTVNAYLFWIPLTTLILVSLALFIVGQNLADASDPRTHR

Nucleotide

• Length: 927 bp

>NTDB_id=1111737 HMPREF9425_RS02785 WP_003094850.1 526208..527134(+) (amiD) [Streptococcus vestibularis ATCC 49124]
ATGGCTTCAATTGATAAAAGTAAGTTCCAATTTGTAAAGCGCGATGATTTTGCCTCTGAAACAATTGATGCACCGGCTTA
CTCATACTGGAAATCAGTGATGCGTCAATTTTTTAAAAAGAAATCAACAGTTGTCATGTTAGGTATCTTGATTGCCATTG
TTTTGATGAGTTTCATCTACCCAATGTTTTCTAAATTTGACTTCAATGATGTCTCAAAAGTAAATGATTTCAGTTTGCGT
TATGTACATCCAAACGCTCAATACTGGTTCGGTACTGACAGTAATGGTAAGTCTCTATTTGACAGTGTTTGGTTCGGAGC
TCGTAATTCTATCCTTATTGCTGTTATCGCTACCTTCCTTAATGTTATAATTGGTTTGATTGTTGGTGCTGTTTGGGGGA
TTTCTAAGACCTTCGATATGATTATGATGGAAATCTACAACATCATCTCAAATATTCCTGACCTCCTTGTGGTTATCGTC
TTGACTTACTCATTGGGTTCTGGTTTCTGGAATATGATCTTTGCCATGACTGTTACAGGATGGATTGGTATTGCCTATAC
TATCCGTATTCAAATCATGCGTTACCGTGATTTGGAGTATAACTTGGCTTCTCGTACTTTGGGAACACCAACTGCTAAGA
TTGTGGTTAAAAATATCATGCCACAACTTGTGTCAGTTATCGTAACCATGGCTAGTCAACTTTTGCCAGGATTTATCTCT
TATGAGGCCTTTCTTTCATACTTTGGTTTGGGACTTCCCGTTACTACGCCTAGTCTTGGTCGTTTGATTTCAGACTATGC
ACAGAACGTTACAGTCAATGCTTATCTCTTCTGGATTCCATTGACTACCTTGATCCTCGTTTCCCTTGCCCTCTTTATTG
TCGGTCAAAACTTGGCGGATGCCAGCGACCCACGTACGCATAGATAG

Domains

Predicted by InterproScan.

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (124-306)

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-71)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus salivarius strain HSISS4	97.403	100	0.974
amiD	Streptococcus thermophilus LMG 18311	97.078	100	0.971
amiD	Streptococcus thermophilus LMD-9	97.078	100	0.971