Detailed information    

insolico Bioinformatically predicted

Overview


Name   comE/blpR   Type   Regulator
Locus tag   ACN076_RS09795 Genome accession   NZ_CP184836
Coordinates   1972142..1972879 (-) Length   245 a.a.
NCBI ID   WP_420789911.1    Uniprot ID   -
Organism   Streptococcus sp. K0074     
Function   activate transcription of early competence genes; regulation of comX expression (predicted from homology)   
Competence regulation

Genomic Context


Location: 1967142..1977879
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACN076_RS09765 (ACN076_09765) - 1967240..1967593 (-) 354 Protein_1877 CPBP family intramembrane glutamate endopeptidase -
  ACN076_RS09770 (ACN076_09770) blpZ 1967623..1967871 (-) 249 WP_420789906.1 immunity protein BlpZ -
  ACN076_RS09775 (ACN076_09775) - 1967912..1968601 (-) 690 WP_420789907.1 CPBP family intramembrane glutamic endopeptidase -
  ACN076_RS09780 (ACN076_09780) - 1968665..1969048 (-) 384 WP_420789908.1 immunity protein -
  ACN076_RS09785 (ACN076_09785) - 1969131..1969535 (-) 405 WP_420789909.1 immunity protein -
  ACN076_RS09790 (ACN076_09790) - 1970788..1972128 (-) 1341 WP_420789910.1 sensor histidine kinase -
  ACN076_RS09795 (ACN076_09795) comE/blpR 1972142..1972879 (-) 738 WP_420789911.1 response regulator transcription factor Regulator
  ACN076_RS09800 (ACN076_09800) - 1973175..1973504 (+) 330 WP_420789912.1 helicase BlpT -
  ACN076_RS09805 (ACN076_09805) - 1973566..1974615 (-) 1050 WP_420789913.1 ABC transporter permease -
  ACN076_RS09810 (ACN076_09810) pptA 1974612..1975343 (-) 732 WP_420789914.1 ABC transporter ATP-binding protein Regulator
  ACN076_RS09815 (ACN076_09815) - 1975411..1975821 (+) 411 WP_001278320.1 HIT family protein -
  ACN076_RS09820 (ACN076_09820) - 1975831..1976118 (+) 288 WP_000777754.1 hypothetical protein -
  ACN076_RS09825 (ACN076_09825) dnaJ 1976399..1977535 (-) 1137 WP_420789915.1 molecular chaperone DnaJ -

Sequence


Protein


Download         Length: 245 a.a.        Molecular weight: 28822.99 Da        Isoelectric Point: 6.5017

>NTDB_id=1111474 ACN076_RS09795 WP_420789911.1 1972142..1972879(-) (comE/blpR) [Streptococcus sp. K0074]
MRIFVLEDDFSQQTRIEATIEKLLKEHHITPSSFEVFGKPEQLLAEVHEKGAHQLFFLDIEIRNEEMKGLEVARKIRNRD
PYALIVFVTTHSEFMPLSFRYQVSALDYIDKALSAEEFESRIETALLYANSQDSKSLAEDCFYFKSKFAQFQYPFKEVYY
LETSPRAHRVILYTKTDRLEFTASLEEVFKQEPRLLQCHRSFLINPANVVRLDKKEKLLYFPNGGSCMIARYKVREVSEA
INNLH

Nucleotide


Download         Length: 738 bp        

>NTDB_id=1111474 ACN076_RS09795 WP_420789911.1 1972142..1972879(-) (comE/blpR) [Streptococcus sp. K0074]
ATGAGAATATTTGTTTTAGAAGATGATTTTTCCCAACAGACTAGGATTGAAGCGACGATTGAGAAACTCTTGAAAGAACA
TCACATCACTCCCAGCTCTTTTGAAGTTTTTGGCAAACCAGAGCAACTGCTGGCTGAAGTGCATGAGAAGGGGGCCCATC
AGCTATTCTTTTTGGATATTGAGATTCGAAATGAGGAGATGAAGGGTCTGGAAGTGGCTAGAAAGATTCGGAATCGGGAT
CCTTATGCCCTGATTGTCTTTGTGACGACTCACTCGGAGTTTATGCCCCTGTCCTTTCGCTACCAAGTGTCTGCTTTGGA
CTACATTGATAAGGCCTTGTCGGCAGAGGAGTTTGAATCTCGGATCGAGACAGCCCTTCTCTATGCCAATAGTCAAGACA
GTAAAAGTCTGGCGGAAGATTGCTTTTACTTTAAATCAAAATTTGCCCAATTTCAGTATCCTTTTAAAGAGGTCTACTAT
CTCGAAACATCGCCCAGAGCCCATCGTGTTATTCTCTATACCAAGACAGACAGACTGGAATTTACAGCGAGTTTAGAGGA
GGTTTTCAAGCAGGAACCTCGTCTCTTGCAGTGCCACCGCTCTTTTCTCATCAATCCTGCCAATGTGGTTCGTTTGGATA
AGAAAGAAAAACTTCTTTACTTTCCCAATGGTGGAAGCTGTATGATAGCGCGTTATAAGGTCAGGGAAGTGTCTGAAGCT
ATCAATAACTTGCATTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comE/blpR Streptococcus mutans UA159

54.733

99.184

0.543

  comE/comE1 Streptococcus equinus JB1

43.882

96.735

0.424

  comE/comE2 Streptococcus equinus JB1

38.843

98.776

0.384

  comE Streptococcus infantis strain Atu-4

36.179

100

0.363


Multiple sequence alignment