Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   ACN076_RS09810 Genome accession   NZ_CP184836
Coordinates   1974612..1975343 (-) Length   243 a.a.
NCBI ID   WP_420789914.1    Uniprot ID   -
Organism   Streptococcus sp. K0074     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1969612..1980343
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACN076_RS09790 (ACN076_09790) - 1970788..1972128 (-) 1341 WP_420789910.1 sensor histidine kinase -
  ACN076_RS09795 (ACN076_09795) comE/blpR 1972142..1972879 (-) 738 WP_420789911.1 response regulator transcription factor Regulator
  ACN076_RS09800 (ACN076_09800) - 1973175..1973504 (+) 330 WP_420789912.1 helicase BlpT -
  ACN076_RS09805 (ACN076_09805) - 1973566..1974615 (-) 1050 WP_420789913.1 ABC transporter permease -
  ACN076_RS09810 (ACN076_09810) pptA 1974612..1975343 (-) 732 WP_420789914.1 ABC transporter ATP-binding protein Regulator
  ACN076_RS09815 (ACN076_09815) - 1975411..1975821 (+) 411 WP_001278320.1 HIT family protein -
  ACN076_RS09820 (ACN076_09820) - 1975831..1976118 (+) 288 WP_000777754.1 hypothetical protein -
  ACN076_RS09825 (ACN076_09825) dnaJ 1976399..1977535 (-) 1137 WP_420789915.1 molecular chaperone DnaJ -
  ACN076_RS09830 (ACN076_09830) - 1977734..1978366 (-) 633 WP_420789916.1 DJ-1/PfpI family protein -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 27174.68 Da        Isoelectric Point: 4.6989

>NTDB_id=1111475 ACN076_RS09810 WP_420789914.1 1974612..1975343(-) (pptA) [Streptococcus sp. K0074]
MLEIKNLTGGYVHVPVLKDVSFTVESGQLVGLIGLNGAGKSTTINEIIGLLTPYSGYININGLTLQEDATSYRKQIGYIP
ETPSLYEELTLREHIETVAMAYGIEQKVAFDRVEPLLKMFRLDQKLDWFPVHFSKGMKQKVMIICAFVVDPSLFIVDEPF
LGLDPLAIADLIQLLEVEKQKGKSILMSTHVLDSAEKMCDAFVILHKGEVRAKGNLLQLREAFDMPEASLNDIYLALTKE
EEL

Nucleotide


Download         Length: 732 bp        

>NTDB_id=1111475 ACN076_RS09810 WP_420789914.1 1974612..1975343(-) (pptA) [Streptococcus sp. K0074]
ATGTTAGAAATTAAAAACCTGACAGGTGGCTATGTTCATGTCCCTGTCTTGAAAGATGTGTCCTTTACTGTTGAAAGTGG
GCAACTGGTCGGTCTGATTGGTCTCAATGGTGCTGGAAAATCGACGACAATCAATGAGATTATTGGTCTGTTGACACCTT
ATAGTGGCTACATCAATATCAATGGCTTGACCCTGCAAGAAGATGCAACGAGCTATCGCAAGCAAATTGGTTACATTCCC
GAGACACCTAGCTTGTATGAGGAATTGACCCTCAGAGAGCATATCGAAACGGTTGCCATGGCTTATGGTATTGAGCAGAA
AGTGGCTTTTGATCGAGTAGAACCTTTGTTAAAAATGTTCCGTCTGGACCAGAAATTAGACTGGTTCCCTGTTCATTTTT
CAAAAGGGATGAAACAGAAGGTCATGATTATCTGTGCTTTTGTGGTGGATCCGAGTCTCTTTATCGTAGATGAGCCTTTT
CTTGGTCTTGATCCGCTGGCTATTGCAGACTTGATTCAGCTTTTGGAAGTGGAAAAGCAAAAGGGAAAGTCCATTCTCAT
GAGTACCCACGTGCTGGATTCAGCGGAGAAGATGTGTGATGCCTTTGTTATTCTCCACAAGGGTGAGGTGCGTGCCAAGG
GGAATCTCTTGCAACTGCGCGAAGCCTTTGACATGCCTGAGGCTAGTTTGAATGATATTTACTTGGCTCTGACCAAAGAG
GAGGAGCTATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.614

99.177

0.72
  pptA Streptococcus thermophilus LMD-9

71.784

99.177

0.712

Multiple sequence alignment