Detailed information    

insolico Bioinformatically predicted

Overview


Name   comEC/celB   Type   Machinery gene
Locus tag   ACN076_RS07670 Genome accession   NZ_CP184836
Coordinates   1561227..1563467 (-) Length   746 a.a.
NCBI ID   WP_420789768.1    Uniprot ID   -
Organism   Streptococcus sp. K0074     
Function   ssDNA transport into the cell (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1556227..1568467
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACN076_RS07640 (ACN076_07640) - 1557131..1557511 (-) 381 WP_070842964.1 VOC family protein -
  ACN076_RS07645 (ACN076_07645) rplT 1557570..1557929 (-) 360 WP_000124834.1 50S ribosomal protein L20 -
  ACN076_RS07650 (ACN076_07650) rpmI 1557981..1558181 (-) 201 WP_001125943.1 50S ribosomal protein L35 -
  ACN076_RS07655 (ACN076_07655) infC 1558214..1558744 (-) 531 WP_000848180.1 translation initiation factor IF-3 -
  ACN076_RS07660 (ACN076_07660) - 1559052..1560236 (-) 1185 WP_420789766.1 hypothetical protein -
  ACN076_RS07665 (ACN076_07665) - 1560240..1560827 (-) 588 WP_420789767.1 ATP-binding cassette domain-containing protein -
  ACN076_RS07670 (ACN076_07670) comEC/celB 1561227..1563467 (-) 2241 WP_420789768.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  ACN076_RS07675 (ACN076_07675) comEA/celA/cilE 1563451..1564101 (-) 651 WP_420789769.1 helix-hairpin-helix domain-containing protein Machinery gene
  ACN076_RS07680 (ACN076_07680) - 1564169..1564738 (-) 570 WP_420789770.1 GNAT family N-acetyltransferase -
  ACN076_RS07685 (ACN076_07685) ald 1564909..1566021 (+) 1113 WP_420789771.1 alanine dehydrogenase -
  ACN076_RS07690 (ACN076_07690) - 1566078..1567073 (-) 996 WP_420789772.1 PhoH family protein -
  ACN076_RS07695 (ACN076_07695) - 1567158..1567373 (-) 216 WP_001232089.1 YozE family protein -
  ACN076_RS07700 (ACN076_07700) cvfB 1567382..1568236 (-) 855 WP_020900277.1 RNA-binding virulence regulatory protein CvfB -

Sequence


Protein


Download         Length: 746 a.a.        Molecular weight: 84651.84 Da        Isoelectric Point: 9.0542

>NTDB_id=1111465 ACN076_RS07670 WP_420789768.1 1561227..1563467(-) (comEC/celB) [Streptococcus sp. K0074]
MLQWIKNLPIPLIYLSFLLLWLYYAIFSASYLALLGFVFLLICLFFQFAWKSASKVLIICGIFGFWFLFQNWQQSQASQN
LADSVERVRILPDTIKVNGDSLSFRGKADGRIFQVYYKFQSEEEKETFQALTDLHEIGLEGKLSEPEGQRNFGGFDYQAY
LKTQGIYQTLNIKKIQSLQKVSSWDIGENLSSLRRKAVVWIKTHFPDPMRNYMTGLLLGHLDTDFEEMNELYSSLGIIHL
FALSGMQVGFFMDGFKKLFLRSGLTQEKLKWLTYPFSLLYAGMTGFSASVIRSLLQKLLAQHGVKGLDNFALTVLVLFII
MPNFFLTAGGVLSCAYAFILTMTSKEEEGLKAVARESLVISLGILPILSFYFAEFQPWSILLTFVFSFLFDLVFLPLLSI
LFAFSFLYPVIQLNFIFEWLEGTIRLVSQLASRPLVFGQPNAWLLILLLISLALIYDLRKNVKKLAVLSLLITGLFLLTK
HPLENEITMLDVGQGESIFLRDVTGKTILIDVGGKAESDKKIEKWQEKVTTSNAQRTLIPYLKSRGVAKIDQLILTNTDK
EHVGDLLEVTKAFHVGEILVSKGSLKQKEFVAELQATQTKVRSVSVGENLPIFGSQLEVLSPRKIGDGDHEDSLVLYGKL
LDKNFLFTGNLEEKGEKDLLKQYPDLEVDVLKASQHGSKKSSSSAFLEQLKPEITLISVGKNNRTKLPHQETLTRLETIN
SKVYRTDQQGAIRFKGWNSWKIESVR

Nucleotide


Download         Length: 2241 bp        

>NTDB_id=1111465 ACN076_RS07670 WP_420789768.1 1561227..1563467(-) (comEC/celB) [Streptococcus sp. K0074]
ATGTTACAGTGGATTAAGAACCTCCCTATTCCCCTAATTTACCTGAGTTTTCTATTGCTCTGGCTTTACTACGCTATTTT
CTCAGCATCCTATCTTGCTTTGTTGGGTTTCGTTTTTCTGCTAATCTGTCTTTTTTTCCAATTTGCTTGGAAATCTGCTA
GTAAAGTTCTAATAATTTGCGGAATCTTTGGCTTCTGGTTTCTGTTTCAAAATTGGCAACAGAGTCAAGCTAGTCAAAAC
CTAGCGGATTCTGTTGAAAGGGTACGGATTTTGCCCGACACTATTAAGGTCAATGGTGACAGTCTATCCTTTCGTGGCAA
GGCTGATGGACGCATTTTTCAAGTCTATTATAAATTCCAGTCCGAGGAGGAGAAAGAAACCTTTCAAGCTTTAACCGACC
TTCATGAGATAGGACTAGAAGGAAAACTTTCAGAACCAGAGGGGCAGAGAAATTTTGGTGGCTTTGACTACCAAGCCTAT
CTGAAGACTCAGGGAATTTACCAGACTCTCAATATCAAAAAAATCCAGTCACTTCAAAAGGTTAGCAGTTGGGATATAGG
TGAAAACCTGTCCAGCTTACGTCGAAAGGCTGTAGTTTGGATTAAGACACATTTTCCAGACCCTATGCGCAATTACATGA
CAGGGCTTTTGCTAGGGCATCTGGACACTGACTTTGAGGAGATGAATGAACTTTATTCTAGTCTAGGAATTATCCACCTC
TTTGCCTTGTCGGGCATGCAGGTAGGTTTTTTCATGGATGGATTTAAGAAACTATTCTTGCGATCAGGCTTGACCCAAGA
AAAGTTGAAATGGCTGACCTATCCCTTTTCCCTTCTCTATGCTGGTATGACAGGATTTTCAGCTTCGGTCATTCGCAGTC
TCTTGCAAAAATTACTGGCTCAACATGGTGTTAAGGGCTTGGATAATTTTGCCTTGACGGTTCTTGTCCTCTTTATTATC
ATGCCTAACTTTTTCTTGACAGCAGGAGGAGTCTTGTCCTGCGCTTATGCTTTTATCTTGACCATGACCAGCAAAGAAGA
GGAGGGGCTCAAGGCTGTTGCTAGAGAAAGTCTAGTCATATCCTTGGGCATATTGCCCATTCTGTCCTTCTATTTTGCAG
AATTTCAGCCTTGGTCTATCCTTTTGACCTTTGTCTTTTCCTTTCTATTTGACTTAGTCTTCTTACCGCTCCTGTCTATT
TTATTTGCCTTTTCATTTCTCTATCCAGTCATTCAGCTGAACTTTATCTTTGAGTGGTTGGAGGGGACTATTCGCTTGGT
ATCGCAGCTGGCAAGCAGACCGCTTGTCTTTGGACAACCTAATGCATGGCTTTTAATTTTATTGTTAATTTCCTTGGCTT
TGATCTATGATTTGAGGAAAAATGTTAAAAAGCTAGCAGTGTTGAGCTTATTGATTACAGGTCTCTTTTTATTGACCAAG
CATCCACTGGAAAATGAAATTACCATGCTGGACGTGGGACAAGGCGAAAGTATTTTCCTAAGGGATGTAACCGGTAAAAC
CATTCTCATAGATGTCGGTGGCAAGGCAGAATCTGATAAGAAAATTGAAAAATGGCAAGAAAAGGTAACGACTAGCAATG
CCCAGCGAACCTTGATTCCCTACCTCAAAAGTCGTGGAGTGGCCAAGATTGACCAGCTAATTTTGACCAATACGGACAAG
GAACATGTTGGAGATTTGTTGGAGGTGACCAAGGCTTTCCATGTAGGGGAAATTTTAGTGTCAAAAGGCAGTCTGAAACA
GAAGGAATTTGTGGCAGAACTACAGGCGACTCAAACCAAGGTGCGTAGTGTGTCAGTGGGAGAGAACTTGCCAATTTTTG
GAAGTCAGTTAGAAGTCCTATCTCCAAGGAAAATAGGAGATGGAGATCATGAAGATTCCCTGGTTTTGTATGGAAAACTC
TTGGATAAAAATTTTCTTTTCACAGGAAATTTGGAGGAGAAAGGAGAGAAGGACTTGCTGAAGCAATATCCTGACTTAGA
GGTGGATGTTTTGAAAGCTAGCCAACATGGCTCTAAAAAATCATCAAGTTCAGCTTTTCTAGAACAGCTCAAACCAGAGA
TCACTCTCATCTCAGTTGGAAAGAACAATCGAACGAAACTCCCCCATCAGGAAACCCTGACCCGACTGGAAACGATCAAT
AGCAAAGTTTACCGAACTGACCAGCAAGGGGCTATACGCTTTAAGGGGTGGAATAGTTGGAAAATCGAAAGTGTTCGATA
G


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEC/celB Streptococcus mitis SK321

93.566

100

0.936

  comEC/celB Streptococcus mitis NCTC 12261

92.483

99.866

0.924

  comEC/celB Streptococcus pneumoniae Rx1

91.823

100

0.918

  comEC/celB Streptococcus pneumoniae D39

91.823

100

0.918

  comEC/celB Streptococcus pneumoniae R6

91.823

100

0.918

  comEC/celB Streptococcus pneumoniae TIGR4

91.555

100

0.916

  comEC Lactococcus lactis subsp. cremoris KW2

45.209

99.33

0.449


Multiple sequence alignment