Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   ACN076_RS07565 Genome accession   NZ_CP184836
Coordinates   1543424..1544377 (-) Length   317 a.a.
NCBI ID   WP_420789758.1    Uniprot ID   -
Organism   Streptococcus sp. K0074     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1538424..1549377
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACN076_RS07545 (ACN076_07545) ftsW 1538498..1539721 (-) 1224 WP_420789755.1 cell division peptidoglycan polymerase FtsW -
  ACN076_RS07550 (ACN076_07550) prsA 1539883..1540821 (-) 939 WP_420789756.1 peptidylprolyl isomerase PrsA -
  ACN076_RS07555 (ACN076_07555) - 1540888..1541601 (-) 714 WP_414304239.1 O-methyltransferase -
  ACN076_RS07560 (ACN076_07560) pepF 1541603..1543405 (-) 1803 WP_420789757.1 oligoendopeptidase F Regulator
  ACN076_RS07565 (ACN076_07565) coiA 1543424..1544377 (-) 954 WP_420789758.1 competence protein CoiA Machinery gene
  ACN076_RS07570 (ACN076_07570) tehB 1544556..1545416 (-) 861 WP_049543521.1 SAM-dependent methyltransferase TehB -
  ACN076_RS07575 (ACN076_07575) smpB 1545432..1545899 (-) 468 WP_001051750.1 SsrA-binding protein SmpB -
  ACN076_RS07580 (ACN076_07580) rnr 1545862..1548216 (-) 2355 WP_420789759.1 ribonuclease R -
  ACN076_RS07585 (ACN076_07585) secG 1548317..1548550 (-) 234 WP_000282517.1 preprotein translocase subunit SecG -
  ACN076_RS07590 (ACN076_07590) rpmG 1548590..1548739 (-) 150 WP_001809104.1 50S ribosomal protein L33 -

Sequence


Protein


Download         Length: 317 a.a.        Molecular weight: 38125.66 Da        Isoelectric Point: 8.7373

>NTDB_id=1111464 ACN076_RS07565 WP_420789758.1 1543424..1544377(-) (coiA) [Streptococcus sp. K0074]
MFVARNARGQLVNVLEGELEKEEYTCPACGGQLRLRQGSSVRTHFAHKSLKDCDYSFENESPEHLANKESLYHWLKKETG
VQLEYPLPDLKQIADLFVNGHLALEVQCSPLPQKLLKERSEGYRSQGYQVLWLLGEKLWLKERLTRLQQGFLYFSQNMGF
YVWELDSEKQVLRLKYLIHQDLRGKLHYQIKEFPYGHGSLLEILRLPYKKQKISHFTVSQDKDICRYIRQQLYYKNPFWM
KEQAEAYQKGENLLTYGLKEWYPQIRPLVGDFCQIEQDLIRYYQYFQTYYRENSQNDWQKLYPPAFYQQYFLKNMVK

Nucleotide


Download         Length: 954 bp        

>NTDB_id=1111464 ACN076_RS07565 WP_420789758.1 1543424..1544377(-) (coiA) [Streptococcus sp. K0074]
ATGTTTGTTGCGAGAAATGCTAGGGGACAGCTGGTAAATGTGTTAGAGGGTGAGCTTGAGAAGGAAGAATACACTTGCCC
AGCTTGTGGAGGTCAGCTCCGTTTGCGTCAAGGATCAAGTGTAAGGACCCATTTTGCTCATAAATCCCTAAAAGACTGCG
ATTATTCCTTTGAAAATGAAAGTCCAGAACACCTGGCAAATAAGGAATCCCTTTATCACTGGTTGAAAAAAGAGACAGGA
GTACAATTAGAATACCCTCTTCCAGATCTTAAACAGATTGCAGATCTATTTGTAAATGGTCATCTTGCTCTAGAAGTTCA
GTGTAGTCCCTTGCCGCAAAAACTTCTTAAAGAGCGAAGTGAGGGCTATCGTAGTCAGGGTTACCAAGTACTGTGGTTGC
TGGGGGAAAAACTTTGGCTCAAGGAGCGGTTGACTCGTCTGCAACAAGGTTTTCTATACTTCAGTCAAAATATGGGATTT
TATGTTTGGGAATTAGACAGTGAAAAGCAAGTTTTAAGACTCAAATACCTGATTCACCAAGATCTCCGAGGTAAACTCCA
TTATCAGATTAAGGAATTTCCCTATGGTCACGGTAGTCTACTGGAGATATTACGTCTTCCCTATAAGAAACAAAAAATAT
CGCATTTTACCGTTTCCCAGGACAAGGACATCTGTCGCTATATCCGGCAACAACTGTATTATAAAAATCCTTTTTGGATG
AAAGAACAAGCAGAAGCCTATCAGAAGGGAGAAAATCTCCTGACTTATGGACTAAAAGAATGGTATCCACAAATTCGACC
ACTAGTAGGCGATTTTTGCCAAATTGAGCAAGATTTGATTCGCTATTATCAGTATTTTCAAACCTATTACCGAGAAAATT
CTCAAAATGATTGGCAAAAGCTTTATCCACCAGCCTTTTATCAGCAATATTTCTTGAAAAATATGGTAAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Streptococcus mitis NCTC 12261

89.905

100

0.899

  coiA Streptococcus pneumoniae TIGR4

88.328

100

0.883

  coiA Streptococcus pneumoniae Rx1

88.328

100

0.883

  coiA Streptococcus pneumoniae D39

88.328

100

0.883

  coiA Streptococcus pneumoniae R6

88.328

100

0.883

  coiA Lactococcus lactis subsp. cremoris KW2

43.827

100

0.448


Multiple sequence alignment