Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   ACN076_RS01280 Genome accession   NZ_CP184836
Coordinates   229114..229872 (-) Length   252 a.a.
NCBI ID   WP_420789998.1    Uniprot ID   -
Organism   Streptococcus sp. K0074     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 224114..234872
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACN076_RS01255 (ACN076_01255) pth 224144..224713 (-) 570 WP_261219448.1 aminoacyl-tRNA hydrolase -
  ACN076_RS01260 (ACN076_01260) ychF 224786..225901 (-) 1116 WP_001218713.1 redox-regulated ATPase YchF -
  ACN076_RS01265 (ACN076_01265) - 225986..226180 (-) 195 WP_000285186.1 DUF951 domain-containing protein -
  ACN076_RS01270 (ACN076_01270) dnaN 226245..227381 (-) 1137 WP_000581172.1 DNA polymerase III subunit beta -
  ACN076_RS01275 (ACN076_01275) dnaA 227540..228901 (-) 1362 WP_023944973.1 chromosomal replication initiator protein DnaA -
  ACN076_RS01280 (ACN076_01280) spo0J 229114..229872 (-) 759 WP_420789998.1 ParB/RepB/Spo0J family partition protein Regulator
  ACN076_RS01285 (ACN076_01285) htrA 229930..231111 (-) 1182 WP_420789999.1 S1C family serine protease Regulator
  ACN076_RS01290 (ACN076_01290) rlmH 231294..231773 (+) 480 WP_153193935.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  ACN076_RS01300 (ACN076_01300) comC 232055..232177 (+) 123 WP_153193936.1 competence-stimulating peptide ComC Regulator
  ACN076_RS01305 (ACN076_01305) comD/comD2 232190..233515 (+) 1326 WP_153193937.1 competence system sensor histidine kinase ComD Regulator
  ACN076_RS01310 (ACN076_01310) comE 233512..234264 (+) 753 WP_000866065.1 competence system response regulator transcription factor ComE Regulator

Sequence

Protein


Download         Length: 252 a.a.        Molecular weight: 28927.26 Da        Isoelectric Point: 7.3184

>NTDB_id=1111420 ACN076_RS01280 WP_420789998.1 229114..229872(-) (spo0J) [Streptococcus sp. K0074]
MEKFEMISITDIQKNPYQPRKEFDGEKLDELAQSIKENGVIQPIIVRKSPVIGYEILAGERRYRASLLAGLTSIPAVVKQ
LSDQEMMVQSIIENLQRENLNPIEEARAYESLVEKGFTHAEIADKMGKSRPYISNSIRLLSLPDAILSEVENGKLSQAHA
RSLVGLNKEQQDYFFQRIIEEDISVRKLEALLTEKKQKKLQKNDHFIQNEEKQLRKLLGLDVEIKLSKKDSGKIIISFSN
QEEYSRIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=1111420 ACN076_RS01280 WP_420789998.1 229114..229872(-) (spo0J) [Streptococcus sp. K0074]
ATGGAAAAATTTGAAATGATTTCTATCACAGATATACAAAAAAATCCCTATCAACCTCGAAAAGAATTTGATGGAGAAAA
ACTAGATGAACTAGCACAGTCTATCAAAGAAAATGGGGTCATTCAACCGATTATTGTTCGTAAATCTCCTGTTATTGGTT
ATGAAATCCTTGCAGGAGAGAGACGCTATCGGGCTTCACTTTTAGCTGGTCTAACGTCTATCCCAGCTGTTGTTAAACAG
CTTTCAGATCAAGAGATGATGGTCCAGTCCATCATTGAAAATTTGCAAAGAGAAAATTTAAATCCAATAGAAGAAGCACG
CGCCTATGAATCTCTTGTAGAGAAAGGATTTACCCATGCTGAAATTGCAGATAAAATGGGCAAGTCTCGTCCATATATCA
GCAACTCCATTCGTTTGCTTTCCTTGCCAGATGCTATCCTCTCAGAAGTAGAAAATGGCAAACTATCACAAGCTCATGCG
CGTTCTCTAGTTGGGTTGAATAAGGAACAACAAGACTATTTCTTTCAACGAATTATAGAAGAAGACATTTCTGTAAGGAA
GTTAGAAGCTCTTCTGACAGAGAAAAAACAAAAGAAACTGCAAAAAAATGATCATTTCATACAAAATGAAGAAAAACAGT
TAAGAAAACTACTCGGATTAGATGTAGAGATTAAACTGTCTAAAAAAGATAGTGGAAAAATTATTATTTCTTTTTCAAAT
CAAGAAGAATACAGTAGAATTATCAACAGCCTGAAATAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(6-94)

HTH domain found in ParB protein (HTH_ParB)

(146-192)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

50.988

100

0.512

Multiple sequence alignment