Detailed information    

insolico Bioinformatically predicted

Overview

Name   ciaH   Type   Regulator
Locus tag   ACNR93_RS04755 Genome accession   NZ_CP184736
Coordinates   950467..951792 (-) Length   441 a.a.
NCBI ID   WP_420543192.1    Uniprot ID   -
Organism   Streptococcus equinus strain NM-2-29     
Function   Required for optimal comC expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 945467..956792
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACNR93_RS04730 (ACNR93_04730) - 946021..947076 (-) 1056 WP_081341131.1 BMP family lipoprotein -
  ACNR93_RS04735 (ACNR93_04735) deoC 947265..947930 (-) 666 WP_021142326.1 deoxyribose-phosphate aldolase -
  ACNR93_RS04740 (ACNR93_04740) - 948433..949023 (-) 591 WP_420543190.1 class I SAM-dependent methyltransferase -
  ACNR93_RS04745 (ACNR93_04745) coaA 949137..950057 (+) 921 WP_420543191.1 type I pantothenate kinase -
  ACNR93_RS04750 (ACNR93_04750) rpsT 950133..950384 (+) 252 WP_004231769.1 30S ribosomal protein S20 -
  ACNR93_RS04755 (ACNR93_04755) ciaH 950467..951792 (-) 1326 WP_420543192.1 sensor histidine kinase Regulator
  ACNR93_RS04760 (ACNR93_04760) ciaR 951782..952456 (-) 675 WP_074450515.1 response regulator transcription factor Regulator
  ACNR93_RS04765 (ACNR93_04765) - 952609..955152 (-) 2544 WP_420543193.1 M1 family metallopeptidase -
  ACNR93_RS04770 (ACNR93_04770) phoU 955360..956013 (-) 654 WP_024344053.1 phosphate signaling complex protein PhoU -

Sequence

Protein


Download         Length: 441 a.a.        Molecular weight: 50226.12 Da        Isoelectric Point: 7.5433

>NTDB_id=1110948 ACNR93_RS04755 WP_420543192.1 950467..951792(-) (ciaH) [Streptococcus equinus strain NM-2-29]
MLNNIQKKLSTGTFSHFFHFFAVFTGIFVIMTFIILQIMRYGLYSSVDTTLQNAANNASDYVTRTMERSDSIQSDNTINE
SGKNKPSSNDGLSNVSVLLYDCNGKIVNALDAFIQFGSLTTSVNDDKIGEISEEKMTTIFGQTEKYHVLTVRVYSSDYPT
IQYATFLISVRQLDEANERYVTITITVMVIFWIISILASVYLANWTRKPILESYEKQKRFVENASHELRTPLAVLQNRLE
SLFRRPDATILDNSESIAASLDEVRNMRILTTNLLNLARRDDGLKVELEEIHPSTFNEIFENYQMIAHENNKKFTAHNFA
NRPIKSDKTLLKQLMTILFDNAIKYTGDDGVIEFTIKTTERQTILTIADNGPGVSDADKQKIFDRFYRVDKARTRQQGGF
GLGLSLAKQIVDALKGDIQVKDNKPKGTIFEVRFNRHNFGK

Nucleotide


Download         Length: 1326 bp        

>NTDB_id=1110948 ACNR93_RS04755 WP_420543192.1 950467..951792(-) (ciaH) [Streptococcus equinus strain NM-2-29]
ATGCTGAATAATATACAGAAAAAATTATCAACGGGGACTTTCTCACACTTTTTTCATTTTTTTGCTGTGTTTACAGGGAT
TTTCGTCATTATGACATTTATTATCCTGCAAATCATGCGATATGGTTTATATTCTTCTGTCGACACGACGTTACAAAATG
CTGCAAATAATGCCAGTGATTACGTTACGAGAACGATGGAGAGAAGTGATTCGATTCAATCTGATAATACGATTAATGAG
TCAGGAAAAAATAAACCAAGTTCTAATGATGGGTTGAGTAATGTTAGTGTCCTTTTGTATGATTGCAACGGTAAAATTGT
CAATGCTTTGGATGCGTTTATTCAATTTGGCTCACTAACGACGAGTGTTAATGATGATAAAATCGGTGAAATAAGCGAAG
AGAAGATGACTACGATTTTCGGTCAAACTGAAAAGTATCACGTCTTGACTGTCAGAGTTTATAGCAGTGATTATCCAACA
ATTCAATACGCAACCTTTCTAATTAGTGTTCGTCAGCTTGACGAAGCAAATGAAAGGTATGTGACAATTACTATTACAGT
TATGGTTATCTTTTGGATTATTTCAATTTTAGCGAGCGTTTATCTTGCTAACTGGACTCGTAAACCGATTCTTGAAAGTT
ATGAGAAACAGAAACGCTTTGTTGAGAATGCCAGTCATGAGTTGAGAACGCCGCTTGCTGTTTTGCAAAATCGTCTTGAA
AGTTTGTTTAGACGTCCAGATGCAACAATTTTAGATAATAGCGAAAGTATTGCTGCAAGTCTTGATGAAGTGCGAAATAT
GCGTATTCTTACAACAAATCTTTTAAATCTTGCTAGACGTGATGACGGTTTGAAAGTTGAATTGGAAGAGATTCATCCAT
CAACCTTTAACGAGATTTTTGAAAATTATCAGATGATTGCTCACGAAAATAATAAAAAGTTTACTGCACACAATTTTGCT
AATCGTCCGATAAAATCAGATAAGACTCTTTTGAAACAACTAATGACTATTTTATTTGATAATGCCATTAAGTACACTGG
TGATGATGGTGTTATTGAATTTACCATTAAAACAACAGAACGCCAAACTATTTTAACTATTGCTGATAACGGACCTGGTG
TTAGTGATGCCGATAAGCAGAAGATTTTTGATCGCTTTTACCGTGTCGACAAGGCAAGGACGCGCCAACAAGGTGGATTT
GGTTTGGGTTTGTCTCTAGCGAAGCAAATTGTTGATGCTTTGAAGGGTGATATTCAGGTTAAAGATAACAAACCAAAAGG
AACTATTTTTGAAGTACGTTTCAACAGACATAATTTTGGTAAATAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(327-434)

His Kinase A (phospho-acceptor) domain (HisKA)

(217-283)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ciaH Streptococcus mutans UA159

59.447

98.413

0.585
  ciaH Streptococcus pneumoniae Rx1

51.835

98.866

0.512
  ciaH Streptococcus pneumoniae D39

51.835

98.866

0.512
  ciaH Streptococcus pneumoniae R6

51.835

98.866

0.512
  ciaH Streptococcus pneumoniae TIGR4

51.835

98.866

0.512

Multiple sequence alignment